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Biological cells embedded in fibrous matrices have been observed to form inter-cellular bands of dense and aligned fibers, through which they mechanically interact over long distances. Such matrix-mediated cellular interactions have been…

Biological Physics · Physics 2018-11-14 Ran S Sopher , Hanan Tokash , Sari Natan , Mirit Sharabi , Ortal Shelah , Oren Tchaicheeyan , Ayelet Lesman

The modeling of the elastic properties of disordered or nanoscale solids requires the foundations of the theory of elasticity to be revisited, as one explores scales at which this theory may no longer hold. The only cases for which…

Materials Science · Physics 2007-05-23 I. Goldhirsch , C. Goldenberg

In a diversity of physiological contexts, eukaryotic cells adhere to an extracellular matrix (ECM), a disordered network with complex nonlinear mechanics. Such cells can perform mechanosensation: using local force probing they can measure…

Soft Condensed Matter · Physics 2022-08-15 Estelle Berthier , Haiqian Yang , Ming Guo , Pierre Ronceray , Chase P. Broedersz

The relationship between network topology and system dynamics has significant implications for unifying our understanding of the interplay among metabolic, gene-regulatory, and ecosystem network architecures. Here we analyze the stability…

Populations and Evolution · Quantitative Biology 2015-06-17 Cameron Smith , Raymond S. Puzio , Aviv Bergman

Structure entails function and thus a structural description of the brain will help to understand its function and may provide insights into many properties of brain systems, from their robustness and recovery from damage, to their dynamics…

Neurons and Cognition · Quantitative Biology 2008-08-27 Marcus Kaiser , Robert Martin , Peter Andras , Malcolm P. Young

Biological membranes are elastic media in which the presence of a transmembrane protein leads to local bilayer deformation. The energetics of deformation allow two membrane proteins in close proximity to influence each other's equilibrium…

Subcellular Processes · Quantitative Biology 2015-06-26 Tristan Ursell , Kerwyn Huang , Eric Peterson , Rob Phillips

Scale-free and non-computable characteristics of natural networks are found to result from the least-time dispersal of energy. To consider a network as a thermodynamic system is motivated since ultimately everything that exists can be…

General Physics · Physics 2011-06-22 Tuomo Hartonen , Arto Annila

A common trait of complex systems is that they can be represented by means of a network of interacting parts. It is, in fact, the network organisation (more than the parts) what largely conditions most higher-level properties, which are not…

Populations and Evolution · Quantitative Biology 2019-07-15 Ricard Sole , Sergi Valverde

Knitted fabrics are metamaterials with remarkable mechanical properties, such as extreme deformability and multiple history-dependent rest shapes. This letter shows that those properties may stem from a continuous set of metastable states…

Soft Condensed Matter · Physics 2024-10-24 Jérôme Crassous , Samuel Poincloux , Audrey Steinberger

When elastic solids are sheared, a nonlinear effect named after Poynting gives rise to normal stresses or changes in volume. We provide a novel relation between the Poynting effect and the microscopic Gr\"uneisen parameter, which quantifies…

Soft Condensed Matter · Physics 2018-04-16 Karsten Baumgarten , Brian P. Tighe

The behaviour of elastic structures undergoing large deformations is the result of the competition between confining conditions, self-avoidance and elasticity. This combination of multiple phenomena creates a geometrical frustration that…

Soft Condensed Matter · Physics 2015-05-19 Mokhtar Adda-Bedia , Arezki Boudaoud , Laurent Boué , Stephanie Deboeuf

Mobility causes network structures to change. In PSNs where underlying network structure is changing rapidly, we are interested in studying how information dissemination can be enhanced in a sparse disconnected network where nodes lack the…

Networking and Internet Architecture · Computer Science 2012-10-22 Rachit Agarwal , Vincent Gauthier , Monique Becker

The mechanical properties of a thin, planar material, perfused by an embedded flow network, can be changed locally and globally by the fluid transport and storage, resulting in small or large-scale deformation, such as out-of-plane…

Soft Condensed Matter · Physics 2023-03-15 Yongtian Luo , Che-Ling Ho , Brent R. Helliker , Eleni Katifori

We explore the robustness of complex networks against physical damage. We focus on spatially embedded network models and datasets where links are physical objects or physically transfer some quantity, which can be disrupted at any point…

Statistical Mechanics · Physics 2024-12-13 Luka Blagojević , Ivan Bonamassa , Márton Pósfai

Stretching, drilling, and bending are the independent deformation modes of a thin shell, each of which has an individual energy content. When the energy content of a mode vanishes, that mode is neutral. We characterize all neutral modes of…

Differential Geometry · Mathematics 2025-10-16 Ande M. Sonnet , Epifanio G. Virga

Understanding crystal growth over arbitrary curved surfaces with arbitrary boundaries is a formidable challenge, stemming from the complexity of formulating non-linear elasticity using geometric invariant quantities. Solutions are generally…

Soft Condensed Matter · Physics 2025-01-22 Yankang Liu , Siyu Li , Roya Zandi , Alex Travesset

Biological cells in soft materials can be modeled as anisotropic force contraction dipoles. The corresponding elastic interaction potentials are long-ranged ($\sim 1/r^3$ with distance $r$) and depend sensitively on elastic constants,…

Soft Condensed Matter · Physics 2009-11-07 U. S. Schwarz , S. A. Safran

A central issue in the study of large complex network systems, such as power grids, financial networks, and ecological systems, is to understand their response to dynamical perturbations. Recent studies recognize that many real networks…

Adaptation and Self-Organizing Systems · Physics 2022-07-26 Chao Duan , Takashi Nishikawa , Deniz Eroglu , Adilson E. Motter

Many growing networks possess accelerating statistics where the number of links added with each new node is an increasing function of network size so the total number of links increases faster than linearly with network size. In particular,…

Molecular Networks · Quantitative Biology 2017-12-22 M. J. Gagen , J. S. Mattick

Geometric constraints impact the formation of a broad range of spatial networks, from amino acid chains folding to proteins structures to rearranging particle aggregates. How the network of interactions dynamically self-organizes in such…

Molecular Networks · Quantitative Biology 2016-10-19 Nora Molkenthin , Marc Timme