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Recent advances in both theory and computational power have created opportunities to simulate biomolecular processes more efficiently using adaptive ensemble simulations. Ensemble simulations are now widely used to compute a number of…

Quantitative Methods · Quantitative Biology 2018-09-27 Peter M. Kasson , Shantenu Jha

Modern computational neuroscience strives to develop complex network models to explain dynamics and function of brains in health and disease. This process goes hand in hand with advancements in the theory of neuronal networks and increasing…

Among the mechanisms for the data security in computer networks is considered trusted routing. Its simulation method is chosen and choice of network simulator is substantiated.

Networking and Internet Architecture · Computer Science 2015-09-11 Osuolale Abdulrahamon Tiamiyu

Despite the rapid development of large language models (LLMs), a fundamental challenge persists: the lack of high-quality optimization modeling datasets hampers LLMs' robust modeling of practical optimization problems from natural language…

Artificial Intelligence · Computer Science 2025-02-24 Hongliang Lu , Zhonglin Xie , Yaoyu Wu , Can Ren , Yuxuan Chen , Zaiwen Wen

Heterogeneous network data with rich nodal information become increasingly prevalent across multidisciplinary research, yet accurately modeling complex nodal heterogeneity and simultaneously selecting influential nodal attributes remains an…

Methodology · Statistics 2026-04-14 Zhaoyu Xing , Xiufan Yu

Metal-organic frameworks (MOFs) offer a vast design space, and as such, computational simulations play a critical role in predicting their structural and physicochemical properties. However, MOF simulations remain difficult to access…

Artificial Intelligence · Computer Science 2026-04-01 Jaewoong Lee , Taeun Bae , Jihan Kim

Agent-based modeling and simulation tools provide a mature platform for development of complex simulations. They however, have not been applied much in the domain of mainstream modeling and simulation of computer networks. In this article,…

Networking and Internet Architecture · Computer Science 2017-08-07 Muaz A. Niazi , Amir Hussain

The integration of artificial intelligence into automated penetration testing (AutoPT) has highlighted the necessity of simulation modeling for the training of intelligent agents, due to its cost-efficiency and swift feedback capabilities.…

Artificial Intelligence · Computer Science 2025-02-18 Yunfei Wang , Shixuan Liu , Wenhao Wang , Changling Zhou , Chao Zhang , Jiandong Jin , Cheng Zhu

While hardware-software co-design has significantly improved the efficiency of neural network inference, modeling the training phase remains a critical yet underexplored challenge. Training workloads impose distinct constraints,…

Machine Learning · Computer Science 2026-03-17 Jérémy Morlier , Robin Geens , Stef Cuyckens , Arne Symons , Marian Verhelst , Vincent Gripon , Mathieu Léonardon

The increasing integration of renewable energy resources requires so-called smart grid services for monitoring, control and automation tasks. Simulation environments are vital for evaluating and developing innovative solutions and…

Networking and Internet Architecture · Computer Science 2024-05-30 Frauke Oest , Emilie Frost , Malin Radtke , Sebastian Lehnhoff

Agent-based modeling and network science have been used extensively to advance our understanding of emergent collective behavior in systems that are composed of a large number of simple interacting individuals or agents. With the increasing…

Multiagent Systems · Computer Science 2019-03-14 Marcos Cardinot , Colm O'Riordan , Josephine Griffith , Matjaž Perc

Training deep learning models, particularly Transformer-based architectures such as Large Language Models (LLMs), demands substantial computational resources and extended training periods. While optimal configuration and infrastructure…

Machine Learning · Computer Science 2024-12-30 Alireza Pourali , Arian Boukani , Hamzeh Khazaei

Complex networks are frequently employed to model physical or virtual complex systems. When certain entities exist across multiple systems simultaneously, unveiling their corresponding relationships across the networks becomes crucial. This…

Physics and Society · Physics 2025-04-16 Rui Tang , Ziyun Yong , Shuyu Jiang , Xingshu Chen , Yaofang Liu , Yi-Cheng Zhang , Gui-Quan Sun , Wei Wang

We present LUNES, an agent-based Large Unstructured NEtwork Simulator, which allows to simulate complex networks composed of a high number of nodes. LUNES is modular, since it splits the three phases of network topology creation, protocol…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-03-19 Gabriele D'Angelo , Stefano Ferretti

We propose InSituNet, a deep learning based surrogate model to support parameter space exploration for ensemble simulations that are visualized in situ. In situ visualization, generating visualizations at simulation time, is becoming…

Image and Video Processing · Electrical Eng. & Systems 2019-10-18 Wenbin He , Junpeng Wang , Hanqi Guo , Ko-Chih Wang , Han-Wei Shen , Mukund Raj , Youssef S. G. Nashed , Tom Peterka

As network traffic monitoring software for cybersecurity, malware detection, and other critical tasks becomes increasingly automated, the rate of alerts and supporting data gathered, as well as the complexity of the underlying model,…

Artificial Intelligence · Computer Science 2013-05-14 Kartik Talamadupula , Octavian Udrea , Anton Riabov , Anand Ranganathan

Machine learning can provide deep insights into data, allowing machines to make high-quality predictions and having been widely used in real-world applications, such as text mining, visual classification, and recommender systems. However,…

Machine Learning · Computer Science 2020-08-11 Meng Wang , Weijie Fu , Xiangnan He , Shijie Hao , Xindong Wu

Artificial neural networks are simple and efficient machine learning tools. Defined originally in the traditional setting of simple vector data, neural network models have evolved to address more and more difficulties of complex real world…

Neural and Evolutionary Computing · Computer Science 2012-10-26 Marie Cottrell , Madalina Olteanu , Fabrice Rossi , Joseph Rynkiewicz , Nathalie Villa-Vialaneix

Quantum networks will enable the implementation of communication tasks with qualitative advantages with respect to the communication networks we know today. While it is expected that the first demonstrations of small scale quantum networks…

Quantum Physics · Physics 2021-02-10 Koji Azuma , Stefan Bäuml , Tim Coopmans , David Elkouss , Boxi Li

Simulation tools are commonly used in the development and testing of new protocols or new networks. However, as satellite networks start to grow to encompass thousands of nodes, and as companies and space agencies begin to realize the…

Networking and Internet Architecture · Computer Science 2025-10-30 Joshua Smailes , Filip Futera , Sebastian Köhler , Simon Birnbach , Martin Strohmeier , Ivan Martinovic