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Speckle-based sensing exploits the rich environmental information of its high-dimensional spatial intensity patterns. However, the requirement for camera-based acquisition and subsequent electronic digitization introduces significant…

Ease of access to data, tools and models expedites scientific research. In structural biology there are now numerous open repositories of experimental and simulated datasets. Being able to easily access and utilise these is crucial for…

With the advent of a new generation of solar telescopes and instrumentation, the interpretation of chromospheric observations (in particular, spectro-polarimetry) requires new, suitable diagnostic tools. This paper describes a new code,…

Solar and Stellar Astrophysics · Physics 2015-06-22 H. Socas-Navarro , J. de la Cruz Rodriguez , A. Asensio Ramos , J. Trujillo Bueno , B. Ruiz Cobo

In the era of post-Moore computing, network offload emerges as a solution to two challenges: the imperative for low-latency communication and the push towards hardware specialisation. Various methods have been employed to offload protocol-…

Networking and Internet Architecture · Computer Science 2024-05-28 Timo Schneider , Pengcheng Xu , Torsten Hoefler

The open-source PyNX toolkit [Favre-Nicolin et al (2011) arXiv:1010.2641, Mandula et al (2016)] has been extended to provide tools for coherent X-ray imaging data analysis and simulation. All calculations can be executed on graphical…

Spiking Neural Networks (SNNs) hold promise for energy-efficient, biologically inspired computing. We identify substantial informatio loss during spike transmission, linked to temporal dependencies in traditional Leaky Integrate-and-Fire…

Neural and Evolutionary Computing · Computer Science 2025-02-04 Guobin Shen , Jindong Li , Tenglong Li , Dongcheng Zhao , Yi Zeng

The purpose of FFREE - the new optical bench devoted to experiments on high-contrast imaging at LAOG - consists in the validation of algorithms based on off-line calibration techniques and adaptive optics (AO) respectively for the wavefront…

Multiplexed immunofluorescence microscopy captures detailed measurements of spatially resolved, multiple biomarkers simultaneously, revealing tissue composition and cellular interactions in situ among single cells. The growing scale and…

Software Engineering · Computer Science 2025-06-03 Fang Liu , Rui He , Andrei Bombin , Ahmad B. Abdallah , Omar Eldaghar , Tommy R. Sheeley , Sam E. Ying , George Zaki

anesthetic is a Python package for processing nested sampling runs, and will be useful for any scientist or statistician who uses nested sampling software. anesthetic unifies many existing tools and techniques in an extensible framework…

Instrumentation and Methods for Astrophysics · Physics 2019-05-14 Will Handley

PySEMTools is a Python-based library for post-processing simulation data produced with high-order hexahedral elements in the context of the spectral element method in computational fluid dynamics. It aims to minimize intermediate steps…

Computational Physics · Physics 2025-04-18 Adalberto Perez , Siavash Toosi , Tim Felle Olsen , Stefano Markidis , Philipp Schlatter

RESPACK is a first-principles calculation software for evaluating the interaction parameters of materials and is able to calculate maximally localized Wannier functions, response functions based on the random phase approximation and related…

Mathematical modeling is a powerful tool in rheology, and we present pyRheo, an open-source package for Python designed to streamline the analysis of creep, stress relaxation, oscillation, and rotation tests. pyRheo contains a comprehensive…

Soft Condensed Matter · Physics 2024-12-23 Isaac Y. Miranda-Valdez , Aaro Niinistö , Tero Mäkinen , Juha Lejon , Juha Koivisto , Mikko J. Alava

We describe the InfraRed Data Reduction (IRDR) software package, a small ANSI C library of fast image processing routines for automated pipeline reduction of infrared (dithered) observations. We developed the software to satisfy certain…

Astrophysics · Physics 2007-05-23 Chris N. Sabbey , Richard G. McMahon , James R. Lewis , Mike J. Irwin

SIPGI is a spectroscopic pipeline for the data reduction of optical/near-infrared data acquired by slit-based spectrographs. SIPGI is a complete spectroscopic data reduction environment retaining the high level of flexibility and accuracy…

Instrumentation and Methods for Astrophysics · Physics 2022-12-13 Susanna Bisogni , Adriana Gargiulo , Marco Fumana , Paolo Franzetti , Letizia Pasqua Cassarà , Marco Scodeggio , Bianca Garilli , Giustina Vietri

Automatic prompt engineering (APE) rewrites prompts to improve downstream task performance, but existing APE loops treat the optimizer itself as a fixed pipeline. We port the code-as-action paradigm of CodeAct (Wang et al., 2024a) to APE…

Computation and Language · Computer Science 2026-05-27 Mengyin Lu , Cong Feng , Huimin Han , Guangming Lu , Yu Sun , Xiaonan Ding , Shihui Long , Fengyi Li , Tanvi Motwani

`scores` is a Python package containing mathematical functions for the verification, evaluation and optimisation of forecasts, predictions or models. It supports labelled n-dimensional (multidimensional) data, which is used in many…

SpectraMatcher is a cross-platform desktop application for interactive comparison of experimental and computed vibronic spectra, designed to assist in the recognition and assignment of spectral patterns. It provides an intuitive graphical…

Chemical Physics · Physics 2025-05-15 Johanna Langner , Isabelle Weber , Henryk A. Witek , Yuan-Pern Lee

We present a data reduction pipeline (DRP) for Keck/NIRSPEC built as an addition to the PypeIt Python package. The DRP is capable of reducing multi-order echelle data taken both before and after the detector upgrade in 2018. As part of…

PyIRD is a Python-based pipeline for reducing spectroscopic data obtained with IRD (InfraRed Doppler; Kotani et al. (2018)) and REACH (Rigorous Exoplanetary Atmosphere Characterization with High dispersion coronagraphy; Kotani et al.…

Instrumentation and Methods for Astrophysics · Physics 2026-01-21 Yui Kasagi , Hajime Kawahara , Ziying Gu , Teruyuki Hirano , Takayuki Kotani , Masayuki Kuzuhara , Kento Masuda

SPREV, short for hyperSphere Reduced to two-dimensional Regular Polygon for Visualisation, is a novel dimensionality reduction technique developed to address the challenges of reducing dimensions and visualizing labeled datasets that…

Graphics · Computer Science 2025-04-16 Srivathsan Amruth
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