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Caenorhabditis elegans (C. elegans) illustrated remarkable behavioral plasticities including complex non-associative and associative learning representations. Understanding the principles of such mechanisms presumably leads to constructive…

Neurons and Cognition · Quantitative Biology 2017-03-28 Ramin M. Hasani , Magdalena Fuchs , Victoria Beneder , Radu Grosu

We investigate how locomotory behavior is generated in the brain focusing on the paradigmatic connectome of nematode Caenorhabditis elegans (C. elegans) and on neuronal activity patterns that control forward locomotion. We map the neuronal…

Adaptation and Self-Organizing Systems · Physics 2020-06-17 Thomas Maertens , Eckehard Schöll , Jorge Ruiz , Philipp Hövel

The small (1 mm) nematode $\textit{Caenorhabditis elegans}$ (Corsi [1], wormbook.org) has become widely used as a model organism; in particular, the $\textit{C. elegans}$ connectome has been completely mapped, and $\textit{C. elegans}$…

Biological Physics · Physics 2021-10-22 Anshul Singhvi , Harold M. Hastings , Jenny Magnes , Susannah G. Zhang

Determining how synaptic coupling within and between regions is modulated during sensory processing is an important topic in neuroscience. Electrophysiological recordings provide detailed information about neural spiking but have…

Neurons and Cognition · Quantitative Biology 2018-02-07 Andrea K. Barreiro , Shree Hari Gautam , Woodrow L. Shew , Cheng Ly

Neuronal growth cones are the most sensitive amongst eukaryotic cells in responding to directional chemical cues. Although a dynamic microtubule cytoskeleton has been shown to be essential for growth cone turning, the precise nature of…

Subcellular Processes · Quantitative Biology 2019-05-16 Saurabh Mahajan , Chaitanya A. Athale

In order to remain adaptable to a dynamic environment, neural activity must be simultaneously both sensitive and stable. To solve this problem, the brain has been hypothesised to sit near a critical boundary. Yet, precisely how criticality…

Neurons and Cognition · Quantitative Biology 2023-04-07 Brandon R. Munn , Eli J. Müller , James M. Shine

Determining neuronal identity in imaging data is an essential task in neuroscience, facilitating the comparison of neural activity across organisms. Cross-organism comparison, in turn, enables a wide variety of research including…

Neurons and Cognition · Quantitative Biology 2022-11-02 Arvind Seshan

Olfactory receptor usage is highly heterogeneous, with some receptor types being orders of magnitude more abundant than others. We propose an explanation for this striking fact: the receptor distribution is tuned to maximally represent…

Neurons and Cognition · Quantitative Biology 2019-01-23 Tiberiu Tesileanu , Simona Cocco , Remi Monasson , Vijay Balasubramanian

Recent whole-brain calcium imaging recordings of the nematode C. elegans have demonstrated that neural activity is dominated by dynamics on a low-dimensional manifold that can be clustered according to behavioral states. Despite progress in…

Neurons and Cognition · Quantitative Biology 2020-02-05 Megan Morrison , Charles Fieseler , J. Nathan Kutz

The sensory-triggered activity of a neuron is typically characterized in terms of a tuning curve, which describes the neuron's average response as a function of a parameter that characterizes a physical stimulus. What determines the shapes…

Neurons and Cognition · Quantitative Biology 2007-05-23 Emilio Salinas

Animals excel at adapting their intentions, attention, and actions to the environment, making them remarkably efficient at interacting with a rich, unpredictable and ever-changing external world, a property that intelligent machines…

Machine Learning · Computer Science 2019-12-09 Nicolas Vecoven , Damien Ernst , Antoine Wehenkel , Guillaume Drion

Sensory stimuli can be recognized more rapidly when they are expected. This phenomenon depends on expectation affecting the cortical processing of sensory information. However, virtually nothing is known on the mechanisms responsible for…

Neurons and Cognition · Quantitative Biology 2018-11-05 Luca Mazzucato , Giancarlo La Camera , Alfredo Fontanini

Background: The roles of neuromodulation in a neural network, such as in a cortical microcolumn, are still incompletely understood. Neuromodulation influences neural processing by presynaptic and postsynaptic regulation of synaptic…

Neurons and Cognition · Quantitative Biology 2019-06-25 Gabriele Scheler

Correlated electrical activity in neurons is a prominent characteristic of cortical microcircuits. Despite a growing amount of evidence concerning both spike-count and subthreshold membrane potential pairwise correlations, little is known…

Neurons and Cognition · Quantitative Biology 2019-07-29 Daniele Linaro , Gabriel K. Ocker , Brent Doiron , Michele Giugliano

We investigate the stimulus-dependent tuning properties of a noisy ionic conductance model for intrinsic subthreshold oscillations in membrane potential and associated spike generation. On depolarization by an applied current, the model…

Neurons and Cognition · Quantitative Biology 2009-11-11 Martin Tobias Huber And Hans Albert Braun

Biological and artificial learning systems alike confront the plasticity-stability dilemma. In the brain, neuromodulators such as acetylcholine and noradrenaline relieve this tension by tuning neuronal gain and inhibitory gating, balancing…

Neurons and Cognition · Quantitative Biology 2025-07-14 Alejandro Rodriguez-Garcia , Christopher J. Whyte , Brandon R. Munn , Jie Mei , James M. Shine , Srikanth Ramaswamy

Recent efforts in neuroscience research seek to obtain detailed anatomical neuronal wiring maps as well as information on how neurons in these networks engage in dynamic activities. Although the entire connectivity map of the nervous system…

Neurons and Cognition · Quantitative Biology 2014-06-09 Tina Schrödel , Robert Prevedel , Karin Aumayr , Manuel Zimmer , Alipasha Vaziri

Sensory systems across all modalities and species exhibit adaptation to continuously changing input statistics. Individual neurons have been shown to modulate their response gains so as to maximize information transmission in different…

Neurons and Cognition · Quantitative Biology 2023-06-01 Lyndon R. Duong , Colin Bredenberg , David J. Heeger , Eero P. Simoncelli

We present a high-throughput optogenetic illumination system capable of simultaneous closed-loop light delivery to specified targets in populations of moving Caenorhabditis elegans. The instrument addresses three technical challenges: it…

Neurons and Cognition · Quantitative Biology 2022-02-01 Mochi Liu , Sandeep Kumar , Anuj K Sharma , Andrew M Leifer