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Traditional drug design faces significant challenges due to inherent chemical and biological complexities, often resulting in high failure rates in clinical trials. Deep learning advancements, particularly generative models, offer potential…

Quantitative Methods · Quantitative Biology 2025-08-27 Mahsa Sheikholeslami , Navid Mazrouei , Yousof Gheisari , Afshin Fasihi , Matin Irajpour , Ali Motahharynia

There is renewed interest in developing small modular reactors and micro-reactors. Innovation is necessary in both construction and operation methods of these reactors to be financially attractive. For operation, an area of interest is the…

Computational Physics · Physics 2020-07-14 Akshay J. Dave , Jarod Wilson , Kaichao Sun

With the boom in the development of computer hardware and software, social media, IoT platforms, and communications, there has been an exponential growth in the volume of data produced around the world. Among these data, relational datasets…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-02-22 Manish Bhattarai , Namita Kharat , Erik Skau , Benjamin Nebgen , Hristo Djidjev , Sanjay Rajopadhye , James P. Smith , Boian Alexandrov

Scene graph generation aims to capture detailed spatial and semantic relationships between objects in an image, which is challenging due to incomplete labelling, long-tailed relationship categories, and relational semantic overlap. Existing…

Computer Vision and Pattern Recognition · Computer Science 2024-03-25 Zeeshan Hayder , Xuming He

Deep Gaussian Processes (DGPs) leverage a compositional structure to model non-stationary processes. DGPs typically rely on local inducing point approximations across intermediate GP layers. Recent advances in DGP inference have shown that…

Machine Learning · Computer Science 2025-04-29 Xinxing Shi , Thomas Baldwin-McDonald , Mauricio A. Álvarez

Functional grasping with dexterous robotic hands is a key capability for enabling tool use and complex manipulation, yet progress has been constrained by two persistent bottlenecks: the scarcity of large-scale datasets and the absence of…

Robotics · Computer Science 2026-01-09 Xingyi He , Adhitya Polavaram , Yunhao Cao , Om Deshmukh , Tianrui Wang , Xiaowei Zhou , Kuan Fang

Dilepton invariant-mass spectra for heavy-ion collisions at SIS 18 and BEVALAC energies are calculated using a coarse-grained time evolution from the Ultra-relativistic Quantum Molecular Dynamics (UrQMD) model. The coarse-graining of the…

Nuclear Theory · Physics 2015-08-04 Stephan Endres , Hendrik van Hees , Janus Weil , Marcus Bleicher

Designing mechanical linkages to achieve target end-effector trajectories presents a fundamental challenge due to the intricate coupling between continuous node placements, discrete topological configurations, and nonlinear kinematic…

Machine Learning · Computer Science 2026-01-08 Yayati Jadhav , Amir Barati Farimani

One of the most important and difficult parts of constructing a multidimensional numerical simulation of flame acceleration and deflagration-to-detonation transition (DDT) in a reacting flow is finding a reliable and affordable model of the…

Fluid Dynamics · Physics 2017-09-04 Carolyn R. Kaplan , Alp Ozgen , Elaine S. Oran

We develop a formalism for calculating forces on the nuclei within the linear-scaling stochastic density functional theory (sDFT) in a nonorthogonal atom-centered basis-set representation (Fabian et al. WIREs Comput Mol Sci. 2019;e1412.…

Chemical Physics · Physics 2022-01-28 Ben Shpiro , Marcel David Fabian , Eran Rabani , Roi Baer

Mapping reaction pathways and transition states (TS) is fundamental to chemistry but computationally expensive at scale. The minimum energy pathway (MEP) dictates reaction rates and mechanisms, yet recovering it via electronic-structure…

Chemical Physics · Physics 2026-05-25 Rémi Schlama , Philippe Schwaller

A skeletal chemical kinetic mechanism containing 252 species and 1288 reactions for the simulation of premixed flames involving isooctane (representing gasoline) and 2MF blends has been proposed in the present work.

Chemical Physics · Physics 2022-12-15 Atmadeep Bhattacharya

Terpene synthases (TPS) are a key family of enzymes responsible for generating the diverse terpene scaffolds that underpin many natural products, including front-line anticancer drugs such as Taxol. However, de novo TPS design through…

We propose an effective lightweight dynamic local and global self-attention network (DLGSANet) to solve image super-resolution. Our method explores the properties of Transformers while having low computational costs. Motivated by the…

Computer Vision and Pattern Recognition · Computer Science 2023-01-06 Xiang Li , Jinshan Pan , Jinhui Tang , Jiangxin Dong

We present transport calculations with the Ultra-relativistic Quantum Molecular Dynamics approach (UrQMD) for dilepton spectra at SIS energies. While we obtain a good agreement with experiment for elementary reactions, in heavy-ion…

Nuclear Theory · Physics 2014-12-09 Stephan Endres , Hendrik van Hees , Janus Weil , Marcus Bleicher

This paper describes a computational model, called the Dirichlet process Gaussian mixture model with latent joints (DPGMM-LJ), that can find latent tree structure embedded in data distribution in an unsupervised manner. By combining…

Robotics · Computer Science 2023-01-18 Tomohiro Mimura , Yoshinobu Hagiwara , Tadahiro Taniguchi , Tetsunari Inamura

According to the dynamical quasiparticle model (DQPM) -- matched to reproduce lattice QCD results in thermodynamic limit, -- the constituents of the strongly interacting quark-gluon plasma (sQGP) are massive and off-shell quasi-particles…

Nuclear Theory · Physics 2014-11-20 E. L. Bratkovskaya , O. Linnyk , W. Cassing

Generalized Estimation Equations (GEE) are a well-known method for the analysis of categorical longitudinal responses. GEE method has computational simplicity and population parameter interpretation. In the presence of missing data it is…

Methodology · Statistics 2015-06-16 José Luiz P. da Silva , Enrico A. Colosimo , Fábio N. Demarqui

In skeleton-based action recognition, Graph Convolutional Networks model human skeletal joints as vertices and connect them through an adjacency matrix, which can be seen as a local attention mask. However, in most existing Graph…

Computer Vision and Pattern Recognition · Computer Science 2022-07-13 Hao Xing , Darius Burschka

The dilepton production by the constituents of the strongly interacting quark-gluon-plasma (sQGP) is addressed. In order to make quantitative predictions at realistically low plasma temperatures (O(T_c)), experimentally relevant low…

High Energy Physics - Phenomenology · Physics 2011-01-17 O. Linnyk