English
Related papers

Related papers: DeepQA: Improving the estimation of single protein…

200 papers

Recent advancements in image quality assessment (IQA), driven by sophisticated deep neural network designs, have significantly improved the ability to approach human perceptions. However, most existing methods are obsessed with fitting the…

Computer Vision and Pattern Recognition · Computer Science 2025-08-26 Shunyu Yao , Ming Liu , Zhilu Zhang , Zhaolin Wan , Zhilong Ji , Jinfeng Bai , Wangmeng Zuo

Blind Image Quality Assessment (BIQA) is a fundamental task in computer vision, which however remains unresolved due to the complex distortion conditions and diversified image contents. To confront this challenge, we in this paper propose a…

Computer Vision and Pattern Recognition · Computer Science 2023-04-12 Guanyi Qin , Runze Hu , Yutao Liu , Xiawu Zheng , Haotian Liu , Xiu Li , Yan Zhang

Image Quality Assessment (IQA) models are increasingly deployed as perceptual critics to guide generative models and image restoration. This role demands not only accurate scores but also actionable, localized feedback. However, current…

Computer Vision and Pattern Recognition · Computer Science 2026-04-21 Xudong Li , Jiaxi Tan , Ziyin Zhou , Yan Zhong , Zihao Huang , Jingyuan Zheng , Yan Zhang , Xiawu Zheng , Rongrong Ji

Despite the significant increase in computational power, molecular modeling of protein structure using classical all-atom approaches remains inefficient, at least for most of the protein targets in the focus of biomedical research. Perhaps…

Biomolecules · Quantitative Biology 2016-11-01 Sebastian Kmiecik , Andrzej Kolinski

As proteins with similar structures often have similar functions, analysis of protein structures can help predict protein functions and is thus important. We consider the problem of protein structure classification, which computationally…

Machine Learning · Statistics 2019-10-08 Hongyu Guo , Khalique Newaz , Scott Emrich , Tijana Milenkovic , Jun Li

This paper presents a computer-aided cytology diagnosis system designed for animals, focusing on image quality assessment (IQA) using Convolutional Neural Networks (CNNs). The system's building blocks are tailored to seamlessly integrate…

In this work, we present a framework for product quality inspection based on deep learning techniques. First, we categorize several deep learning models that can be applied to product inspection systems. Also we explain entire steps for…

Machine Learning · Computer Science 2021-09-09 Tae-Hyun Kim , Hye-Rin Kim , Yeong-Jun Cho

Motivation: With the development of third-generation sequencing technologies, people are able to obtain DNA sequences with lengths from 10s to 100s of kb. These long reads allow protein domain annotation without assembly, thus can produce…

Genomics · Quantitative Biology 2021-07-09 Du Nan , Jiayu Shang , Yanni Sun

Image Quality Assessment (IQA) is of great value in the workflow of Magnetic Resonance Imaging (MRI)-based analysis. Blind IQA (BIQA) methods are especially required since high-quality reference MRI images are usually not available.…

Image and Video Processing · Electrical Eng. & Systems 2021-07-16 Kehan Qi , Haoran Li , Chuyu Rong , Yu Gong , Cheng Li , Hairong Zheng , Shanshan Wang

Complexes of physically interacting proteins are one of the fundamental functional units responsible for driving key biological mechanisms within the cell. Their identification is therefore necessary not only to understand complex formation…

Computational Engineering, Finance, and Science · Computer Science 2012-11-27 Sriganesh Srihari , Hon Wai Leong

Protein secondary structure prediction is an important problem in bioinformatics. Inspired by the recent successes of deep neural networks, in this paper, we propose an end-to-end deep network that predicts protein secondary structures from…

Biomolecules · Quantitative Biology 2016-04-27 Zhen Li , Yizhou Yu

Survival analysis is playing a major role in manufacturing sector by analyzing occurrence of any unwanted event based on the input data. Predictive maintenance, which is a part of survival analysis, helps to find any device failure based on…

Machine Learning · Computer Science 2022-05-31 Renith G , Harikrishna Warrier , Yogesh Gupta

Blind image quality assessment (BIQA) methods often incorporate auxiliary tasks to improve performance. However, existing approaches face limitations due to insufficient integration and a lack of flexible uncertainty estimation, leading to…

Computer Vision and Pattern Recognition · Computer Science 2026-02-24 Yiwei Lou , Yuanpeng He , Rongchao Zhang , Yongzhi Cao , Hanpin Wang , Yu Huang

Understanding protein solubility is essential for their functional applications. Computational methods for predicting protein solubility are crucial for reducing experimental costs and enhancing the efficiency and success rates of protein…

Quantitative Methods · Quantitative Biology 2024-07-01 Yang Tan , Jia Zheng , Liang Hong , Bingxin Zhou

Proteins play a pivotal role in biological systems. The use of machine learning algorithms for protein classification can assist and even guide biological experiments, offering crucial insights for biotechnological applications. We…

Quantitative Methods · Quantitative Biology 2024-10-24 Yizheng Wang , Yixiao Zhai , Yijie Ding , Quan Zou

Statistical models of natural stimuli provide an important tool for researchers in the fields of machine learning and computational neuroscience. A canonical way to quantitatively assess and compare the performance of statistical models is…

Machine Learning · Statistics 2012-09-17 Lucas Theis , Sebastian Gerwinn , Fabian Sinz , Matthias Bethge

Motivation Protein fold recognition is an important problem in structural bioinformatics. Almost all traditional fold recognition methods use sequence (homology) comparison to indirectly predict the fold of a tar get protein based on the…

Machine Learning · Computer Science 2017-06-06 Jie Hou , Badri Adhikari , Jianlin Cheng

Protein activity is a significant characteristic for recombinant proteins which can be used as biocatalysts. High activity of proteins reduces the cost of biocatalysts. A model that can predict protein activity from amino acid sequence is…

Quantitative Methods · Quantitative Biology 2018-07-23 X. Han , X. Wang , K. Zhou

Portrait images typically consist of a salient person against diverse backgrounds. With the development of mobile devices and image processing techniques, users can conveniently capture portrait images anytime and anywhere. However, the…

Computer Vision and Pattern Recognition · Computer Science 2024-05-15 Wei Sun , Weixia Zhang , Yanwei Jiang , Haoning Wu , Zicheng Zhang , Jun Jia , Yingjie Zhou , Zhongpeng Ji , Xiongkuo Min , Weisi Lin , Guangtao Zhai

Deep Learning has a hierarchical network architecture to represent the complicated feature of input patterns. The adaptive structural learning method of Deep Belief Network (DBN) has been developed. The method can discover an optimal number…

Neural and Evolutionary Computing · Computer Science 2018-08-28 Shin Kamada , Takumi Ichimura , Toshihide Harada