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How large ecosystems can create and maintain the remarkable biodiversity we see in nature is probably one of the biggest open questions in science, attracting attention from different fields, from Theoretical Ecology to Mathematics and…

Populations and Evolution · Quantitative Biology 2023-01-03 Violeta Calleja-Solanas , Nagi Khalil , Jesús Gómez-Gardeñes , Emilio Hernández-García , Sandro Meloni

The intensification and increased frequency of weather extremes is emerging as one of the most important aspects of climate change. We use Monte Carlo simulation to understand and predict the consequences of variations in trends (i.e.,…

Populations and Evolution · Quantitative Biology 2011-08-26 Simone Vincenzi , Michele Bellingeri

Environmental variation can play an important role in ecological competition by influencing the relative advantage between competing species. Here, we consider such effects by extending a classical, competitive Moran model to incorporate an…

Populations and Evolution · Quantitative Biology 2019-09-18 Ryan Murray , Glenn Young

In a multiverse context, determining the probability of being in our particular universe depends on estimating its overall habitability compared to other universes with different values of the fundamental constants. One of the most…

Earth and Planetary Astrophysics · Physics 2019-08-15 McCullen Sandora

In this paper we study the evolution of the mutation rate for simple organisms in dynamic environments. A model with multiple fitness coding loci tracking a moving fitness peak is developed and an analytical expression for the optimal…

Biological Physics · Physics 2007-05-23 Martin Nilsson , Nigel Snoad

We consider stochastic growth models for populations organized in colonies and subject to uniform catastrophes. To assess population viability, we analyze scenarios in which individuals adopt dispersion strategies after catastrophic events.…

Probability · Mathematics 2026-02-09 Joan Amaya , Valdivino V. Junior , Fábio P. Machado , Alejandro Roldán-Correa

Survival models are used in various fields, such as the development of cancer treatment protocols. Although many statistical and machine learning models have been proposed to achieve accurate survival predictions, little attention has been…

Machine Learning · Computer Science 2020-03-26 Hrushikesh Loya , Pranav Poduval , Deepak Anand , Neeraj Kumar , Amit Sethi

Living groups move in complex environments and are constantly subject to external stimuli, predatory attacks and disturbances. An efficient response to such perturbations is vital to maintain the group's coherence and cohesion.…

Statistical Mechanics · Physics 2023-04-12 Emanuele Loffredo , Davide Venturelli , Irene Giardina

In this paper we provide a broad framework for describing learning agents in general quantum environments. We analyze the types of classically specified environments which allow for quantum enhancements in learning, by contrasting…

Quantum Physics · Physics 2015-07-31 Vedran Dunjko , Jacob M. Taylor , Hans J. Briegel

Evolution and learning are two of the fundamental mechanisms by which life adapts in order to survive and to transcend limitations. These biological phenomena inspired successful computational methods such as evolutionary algorithms and…

Neural and Evolutionary Computing · Computer Science 2019-05-10 Jan Schuchardt , Vladimir Golkov , Daniel Cremers

We present a theoretical as well as experimental investigation of a population of self-replicating segments of code subject to random mutation and survival of the fittest. Under the assumption that such a system constitutes a minimal system…

adap-org · Physics 2008-02-03 Chris Adami

We study the asymptotic behaviour of the survival probability of a multitype branching process in random environment. The class of processes we consider here corresponds, in the one-dimensional situation, to the strongly subcritical case.…

Probability · Mathematics 2017-11-21 Vladimir Vatutin , Vitali Wachtel

The diversity and quality of natural systems have been a puzzle and inspiration for communities studying artificial life. It is now widely admitted that the adaptation mechanisms enabling these properties are largely influenced by the…

Populations and Evolution · Quantitative Biology 2022-07-08 Eleni Nisioti , Clément Moulin-Frier

Microbial populations generally evolve in volatile environments, under conditions fluctuating between harsh and mild, e.g. as the result of sudden changes in toxin concentration or nutrient abundance. Environmental variability thus shapes…

Populations and Evolution · Quantitative Biology 2023-12-07 Matthew Asker , Lluís Hernández-Navarro , Alastair M. Rucklidge , Mauro Mobilia

We propose a general scenario to analyze social and economic changes in modern environments. We illustrate the ideas with a model that incorporating the main trends is simple enough to extract analytical results and, at the same time,…

Statistical Mechanics · Physics 2009-10-31 A. Arenas , A. Diaz-Guilera , C. J. Perez , F. Vega-Redondo

Local decision rules are commonly understood to be more explainable, due to the local nature of the patterns involved. With numerical optimization methods such as gradient boosting, ensembles of local decision rules can gain good predictive…

Machine Learning · Computer Science 2025-08-27 Xin Du , Subramanian Ramamoorthy , Wouter Duivesteijn , Jin Tian , Mykola Pechenizkiy

Context-dependent nature of biological phenomena are well documented in every branch of biology. While there have been few previous attempts to (implicitly) model various facets of biological context-dependence, a formal and general…

Other Quantitative Biology · Quantitative Biology 2011-11-28 Anirban Banerji

Standard evolutionary theories of aging and mortality, implicitly based on assumptions of spatial averaging, hold that natural selection cannot favor shorter lifespan without direct compensating benefit to individual reproductive success.…

Populations and Evolution · Quantitative Biology 2015-06-15 Justin Werfel , Donald E. Ingber , Yaneer Bar-Yam

Complex evolving systems such as the biosphere, ecosystems and societies exhibit sudden collapses, for reasons that are only partially understood. Here we study this phenomenon using a mathematical model of a system that evolves under…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Ravi Mehrotra , Vikram Soni , Sanjay Jain

We present a new model for extinction in which species evolve in bursts or `avalanches', during which they become on average more susceptible to environmental stresses such as harsh climates and so are more easily rendered extinct. Results…

adap-org · Physics 2008-02-03 M. E. J. Newman , B. W. Roberts