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The reward system is one of the fundamental drivers of animal behaviors and is critical for survival and reproduction. Despite its importance, the problem of how the reward system has evolved is underexplored. In this paper, we try to…

Neural and Evolutionary Computing · Computer Science 2024-06-24 Yuji Kanagawa , Kenji Doya

A question in evolutionary biology is why the number of males is approximately equal to that of females in many species, and Fisher's theory of equal investment answers that it is the evolutionarily stable state. The Fisherian mechanism can…

Populations and Evolution · Quantitative Biology 2019-02-05 Minjae Kim , Hyeong-Chai Jeong , Seung Ki Baek

We define a general class of models representing natural selection between two alleles. The population size and spatial structure are arbitrary, but fixed. Genetics can be haploid, diploid, or otherwise; reproduction can be asexual or…

Populations and Evolution · Quantitative Biology 2021-02-05 Benjamin Allen , Alex McAvoy

These notes introduce probabilistic landscape models defined on high-dimensional discrete sequence spaces. The models are motivated primarily by fitness landscapes in evolutionary biology, but links to statistical physics and computer…

Populations and Evolution · Quantitative Biology 2025-12-24 Sakshi Pahujani , Joachim Krug

We describe the simulation method of modelling the population evolution using Monte Carlo based on the Penna model. Individuals in the populations are represented by their diploid genomes. Genes expressed after the minimum reproduction age…

Genomics · Quantitative Biology 2009-01-13 Agnieszka Laszkiewicz , Przemyslaw Biecek , Katarzyna Bonkowska , Stanislaw Cebrat

We considered a {multi-block} molecular model of biological evolution, in which fitness is a function of the mean types of alleles located at different parts (blocks) of the genome. We formulated an infinite population model with selection…

Populations and Evolution · Quantitative Biology 2015-06-12 David B. Saakian , Zara Kirakosyan , Chin-Kun Hu

Our understanding of risk preferences can be sharpened by considering their evolutionary basis. The existing literature has focused on two sources of risk: idiosyncratic risk and aggregate risk. We introduce a new source of risk, heritable…

Theoretical Economics · Economics 2021-07-28 Yuval Heller , Arthur Robson

A challenging simulation of evolutionary dynamics based on a three-state cellular automaton is used as a test of how cooperation can drive the evolution of complex traits. Building on the approach of Wolfram (2025), the fitness of a…

Populations and Evolution · Quantitative Biology 2025-04-08 Conor Houghton

We elaborate further on the evolution properties of cosmological fluctuations through a bounce. We show this evolution to be describable either by ``transmission'' and ``reflection'' coefficients or by an effective unitary S-matrix. We also…

High Energy Physics - Theory · Physics 2009-11-10 Jerome Martin , Patrick Peter

The ability of genetic isolation to block gene flow plays a key role in the speciation of sexually reproducing organisms. This paper analyses the hybrid zone dynamics affected by "weak" Haldane's rule, namely the incomplete hybrids…

Populations and Evolution · Quantitative Biology 2012-02-17 Renxue Wang

We study the Tangled Nature model of macro evolution and demonstrate that the co-evolutionary dynamics produces an increasingly correlated core of well occupied types. At the same time the entire configuration of types becomes increasing…

Statistical Mechanics · Physics 2015-03-13 Dominic Jones , Henrik Jeldtoft Jensen , Paolo Sibani

A general approach to optimizing fast processes using a gender genetic algorithm is described. Its difference from the more traditional genetic algorithm it contains division the artificial population into two sexes. Male subpopulations…

Neural and Evolutionary Computing · Computer Science 2020-02-17 P. A. Golovinski , S. A. Kolodyazhnyi

Mutualistic interactions, which are beneficial for both interacting species, are recurrently present in ecosystems. Observations of natural systems showed that, if we draw mutualistic relationships as binary links between species, the…

Physics and Society · Physics 2019-08-21 Clàudia Payrató Borrás , Laura Hernández , Yamir Moreno

Modifying the Redfield model of sexual reproduction and the Penna model of biological aging, we compare reproduction with and without recombination in age-structured populations. In contrast to Redfield and in agreement with Bernardes we…

In a laboratory experiment, round by round, individual interactions should lead to the social evolutionary rotation in population strategy state space. Successive switching the incentive parameter should lead to successive change of the…

Methodology · Statistics 2012-07-25 Zhijian Wang , Bin Xu

Eukaryotic cells are often exposed to fluctuations in growth conditions as well as endogenous and exogenous stress-related agents. In addition, during development global patterns of gene transcription change dramatically, and these changes…

Genomics · Quantitative Biology 2008-12-23 John Herrick

In the present article, we investigate the effects of dormancy on an abstract population genetic level. We first provide a short review of seed bank models in population genetics, and the role of dormancy for the interplay of evolutionary…

Probability · Mathematics 2020-12-03 Jochen Blath , Noemi Kurt

Biological forces govern essential cellular and molecular processes in all living organisms. Many cellular forces, e.g. those generated in cyclic conformational changes of biological machines, have repetitive components. However, little is…

Biomolecules · Quantitative Biology 2008-09-17 P. Szymczak , Harald Janovjak

Can lifetime learning expand behavioral diversity over evolutionary time, rather than collapsing it? Prior theory predicts that plasticity reduces variance by buffering organisms against environmental noise. We test this in a competitive…

Artificial Intelligence · Computer Science 2026-04-07 Diego Armando Resendez Prado

Evolutionary game dynamics is one of the most fruitful frameworks for studying evolution in different disciplines, from Biology to Economics. Within this context, the approach of choice for many researchers is the so-called replicator…

Populations and Evolution · Quantitative Biology 2009-11-14 Carlos P. Roca , José A. Cuesta , Angel Sánchez