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RNAnet provides a bridge between two widely used Human gene databases. Ensembl describes DNA sequences and transcripts but not experimental gene expression. Whilst NCBI's GEO contains actual expression levels from Human samples. RNAnet…

Molecular Networks · Quantitative Biology 2010-01-26 W. B. Langdon , Olivia Sanchez Graillet , A. P. Harrison

Untargeted metabolomics using LC-MS/MS offers the potential to comprehensively profile the chemical diversity of biological samples. However, the process is fundamentally limited by the "identification bottleneck," where only a small…

Quantitative Methods · Quantitative Biology 2025-10-14 Hansol Hong , Sangwon Lee , Jang-Ho Ha , Sung-June Chu , So-Hee An , Woo-Hyun Paek , Gyuhwa Chung , Kyoung Tai No

3D human reconstruction and animation are long-standing topics in computer graphics and vision. However, existing methods typically rely on sophisticated dense-view capture and/or time-consuming per-subject optimization procedures. To…

Graphics · Computer Science 2025-06-04 Zhiyuan Yu , Zhe Li , Hujun Bao , Can Yang , Xiaowei Zhou

Estimating 3D mesh of the human body from a single 2D image is an important task with many applications such as augmented reality and Human-Robot interaction. However, prior works reconstructed 3D mesh from global image feature extracted by…

Computer Vision and Pattern Recognition · Computer Science 2021-06-08 Wang Zeng , Wanli Ouyang , Ping Luo , Wentao Liu , Xiaogang Wang

Generalizable neural surface reconstruction techniques have attracted great attention in recent years. However, they encounter limitations of low confidence depth distribution and inaccurate surface reasoning due to the oversimplified…

Computer Vision and Pattern Recognition · Computer Science 2023-11-03 Yixun Liang , Hao He , Ying-cong Chen

It is known that the kinematics of the human body skeleton reveals valuable information in action recognition. Recently, modeling skeletons as spatio-temporal graphs with Graph Convolutional Networks (GCNs) has been reported to solidly…

Computer Vision and Pattern Recognition · Computer Science 2021-05-17 Bruno Degardin , Vasco Lopes , Hugo Proença

Current connectivity diagrams of human brain image data are either overly complex or overly simplistic. In this work we introduce simple yet accurate interactive visual representations of multiple brain image structures and the connectivity…

Graphics · Computer Science 2016-09-02 Saad Nadeem , Arie Kaufman

Monocular 3D clothed human reconstruction aims to create a complete 3D avatar from a single image. To tackle the human geometry lacking in one RGB image, current methods typically resort to a preceding model for an explicit geometric…

Computer Vision and Pattern Recognition · Computer Science 2025-06-17 Nanjie Yao , Gangjian Zhang , Wenhao Shen , Jian Shu , Hao Wang

One of the defining features of living systems is their adaptability to changing environmental conditions. This requires organisms to extract temporal and spatial features of their environment, and use that information to compute the…

Neurons and Cognition · Quantitative Biology 2024-02-27 Maria Sol Vidal-Saez , Oscar Vilarroya , Jordi Garcia-Ojalvo

We introduce DualMap, an online open-vocabulary mapping system that enables robots to understand and navigate dynamically changing environments through natural language queries. Designed for efficient semantic mapping and adaptability to…

Robotics · Computer Science 2025-12-16 Jiajun Jiang , Yiming Zhu , Zirui Wu , Jie Song

Analyzing open-ended survey responses is a crucial yet challenging task for social scientists, non-profit organizations, and educational institutions, as they often face the trade-off between obtaining rich data and the burden of reading…

Computation and Language · Computer Science 2023-06-28 Doug Beeferman , Nabeel Gillani

We propose LookinGood^{\pi}, a novel neural re-rendering approach that is aimed to (1) improve the rendering quality of the low-quality reconstructed results from human performance capture system in real-time; (2) improve the generalization…

Computer Vision and Pattern Recognition · Computer Science 2023-02-17 Xiqi Yang , Kewei Yang , Kang Chen , Weidong Zhang , Weiwei Xu

We propose DeepHuman, an image-guided volume-to-volume translation CNN for 3D human reconstruction from a single RGB image. To reduce the ambiguities associated with the surface geometry reconstruction, even for the reconstruction of…

Computer Vision and Pattern Recognition · Computer Science 2019-03-29 Zerong Zheng , Tao Yu , Yixuan Wei , Qionghai Dai , Yebin Liu

Identifying potential drug targets using metabolic modeling requires integrating multiple modeling methods and heterogenous biological datasets, which can be challenging without sophisticated tools. We developed COMO, a user-friendly…

Magnetic vector tomography allows for visualizing the 3D magnetization vector of magnetic nanostructures and multilayers with nanometric resolution. In this work, we present MARTApp (Magnetic Analysis and Reconstruction of Tomographies…

This paper proposes the use of an end-to-end Convolutional Neural Network for direct reconstruction of the 3D geometry of humans via volumetric regression. The proposed method does not require the fitting of a shape model and can be trained…

Computer Vision and Pattern Recognition · Computer Science 2018-09-12 Aaron S. Jackson , Chris Manafas , Georgios Tzimiropoulos

Optimization-based models have been used to predict cellular behavior for over 25 years. The constraints in these models are derived from genome annotations, measured macro-molecular composition of cells, and by measuring the cell's growth…

Quantitative Methods · Quantitative Biology 2019-05-21 Laurence Yang , Michael A. Saunders , Jean-Christophe Lachance , Bernhard O. Palsson , José Bento

Image restoration~(IR), as a fundamental multimedia data processing task, has a significant impact on downstream visual applications. In recent years, researchers have focused on developing general-purpose IR models capable of handling…

Computer Vision and Pattern Recognition · Computer Science 2025-04-22 Yubin Gu , Yuan Meng , Kaihang Zheng , Xiaoshuai Sun , Jiayi Ji , Weijian Ruan , Liujuan Cao , Rongrong Ji

Integration of transcriptomic and metabolomic data improves functional interpretation of disease-related metabolomic phenotypes, and facilitates discovery of putative metabolite biomarkers and gene targets. For this reason, these data are…

Switching between different levels of resolution is essential for multiscale modeling, but restoring details at higher resolution remains challenging. In our previous study we have introduced deepBackmap: a deep neural-network-based…

Chemical Physics · Physics 2024-06-12 Marc Stieffenhofer , Tristan Bereau , Michael Wand
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