English
Related papers

Related papers: Macroscopic limits of pathway-based kinetic models…

200 papers

Simulations are performed to investigate the nonlinear dynamics of a (2+1)-dimensional chemotaxis model of Keller-Segel (KS) type with a logistic growth term. Because of its ability to display auto-aggregation, the KS model has been widely…

Biological Physics · Physics 2011-11-14 S. Banerjee , A. P. Misra , L. Rondoni

We investigate the (reduced) Keller-Segel equations modeling chemotaxis of bio-organisms. We present a formal derivation and partial rigorous results of the blowup dynamics of solution of these equations describing the chemotactic…

Pattern Formation and Solitons · Physics 2014-07-03 S. I. Dejak , D. Egli , P. M. Lushnikov , I. M. Sigal

We study the well-posedness of the biological models with AHL-dependent cell mobility on engineered Escherichia coli populations. For the kinetic model proposed by Xue-Xue-Tang recently, the local existence for large initial data is proved…

Analysis of PDEs · Mathematics 2021-08-26 Ning Jiang , Jiangyan Liang , Yi-Long Luo , Min Tang , Yaming Zhang

We consider the Keller-Segel model for chemotaxis with a nonlinear diffusion coefficent and a singular sensitivity function. We show the existence of travelling waves for wave speeds above a critical value, and establish local…

Analysis of PDEs · Mathematics 2012-02-20 Martin Meyries

Chemotaxis plays a crucial role in a variety of processes in biology and ecology. Quite often it acts to improve efficiency of biological reactions; one example is the immune system signalling, where infected tissues release chemokines…

Analysis of PDEs · Mathematics 2025-08-20 Jing An , Alexander Kiselev , Yao Yao

Autologous chemotaxis, in which cells secrete and detect molecules to determine the direction of fluid flow, is thwarted at high cell density because molecules from other cells interfere with a given cell's signal. Using a minimal model of…

Biological Physics · Physics 2022-09-14 Michael Vennettilli , Louis Gonzalez , Nicholas Hilgert , Andrew Mugler

This paper is concerned with a parabolic-elliptic Keller-Segel system where both diffusive and chemotactic coefficients (motility functions) depend on the chemical signal density. This system was originally proposed by Keller and Segel in…

Analysis of PDEs · Mathematics 2021-07-28 Zhi-An Wang

In this paper, we focus on the Keller-Segel chemotaxis system in a random heterogeneous domain. We assume that the corresponding diffusion and chemotaxis coefficients are given by stationary ergodic random fields and apply stochastic…

Analysis of PDEs · Mathematics 2016-09-16 Anastasios Matzavinos , Mariya Ptashnyk

A review of the mechanisms of speciation is performed. The mechanisms of the evolution of species, taking into account the feedback of the state of the environment and mechanisms of the emergence of complexity, are considered. It is shown…

Populations and Evolution · Quantitative Biology 2018-07-18 Alexey V. Melkikh , Alexey V. Melkikh , Andrei Khrennikov

The purpose of this paper is to study the properties of kinetic models for traffic flow described by a Boltzmann-type approach and based on a continuous space of microscopic velocities. In our models, the particular structure of the…

Numerical Analysis · Mathematics 2016-12-30 Gabriella Puppo , Matteo Semplice , Andrea Tosin , Giuseppe Visconti

The bacterium E. coli maneuvers itself to regions with high chemoattractant concentrations by performing two stereotypical moves: `runs', in which it moves in near straight lines, and `tumbles', in which it does not advance but changes…

Cell Behavior · Quantitative Biology 2007-11-29 Yariv Kafri , Rava Azeredo da Silveira

The purpose of this work is the study of \textit{chemotaxis} and how to model it through the equations of Keller-Segel. \textit{Chemotaxis} is a natural process which induces the organisms to direct their movement according to certain…

Analysis of PDEs · Mathematics 2021-11-24 Alejandro Fernández-Jiménez

Cell-cell adhesion plays a vital role in the development and maintenance of multicellular organisms. One of its functions is regulation of cell migration, such as occurs, e.g. during embryogenesis or in cancer. In this work, we develop a…

Tissues and Organs · Quantitative Biology 2024-03-08 Anna Zhigun , Mabel Lizzy Rajendran

We study a modified version of an initial-boundary value problem describing the formation of colony patterns of bacteria \textit{Escherichia Coli}. The original system of three parabolic equations was studied numerically and analytically…

Analysis of PDEs · Mathematics 2020-11-03 Danielle Hilhorst , Pierre Roux

Chemotaxis phenomena govern the directed movement of micro-organisms in response to chemical stimuli. In this paper, we investigate two Keller--Segel systems of reaction-advection-diffusion equations modeling chemotaxis on thin networks.…

Analysis of PDEs · Mathematics 2024-04-02 Hewan Shemtaga , Wenxian Shen , Selim Sukhtaiev

Extending the classic works of Berg and Purcell on the biophysics of bacterial chemotaxis, we find the optimal chemotactic strategy for the peritrichous bacterium E. Coli in the high and low signal to noise ratio limits. The optimal…

adap-org · Physics 2009-10-30 S. P. Strong , B. Freedman , William Bialek , R. Koberle

Escherichia coli has long been used as a model organism due to the extensive experimental characterization of its pathways and molecular components. Take chemotaxis as an example, which allows bacteria to sense and swim in response to…

Cell Behavior · Quantitative Biology 2015-12-09 Gabriele Micali , Robert G. Endres

This paper concerns a model for tumor cell migration through the surrounding extracellular matrix by considering mass balance phenomena involving the chemical interactions produced on the cell surface. The well-posedness of this model is…

Analysis of PDEs · Mathematics 2015-09-03 J. Nieto , L. Urrutia

In this paper the first equation within a class of well known chemotaxis systems is derived as a hydrodynamic limit from a stochastic interacting many particle system on the lattice. The cells are assumed to interact with attractive…

Probability · Mathematics 2018-04-26 Stefan Grosskinsky , Daniel Marahrens , Angela Stevens

This article presents a partial differential equation (PDE) of Keller-Segel (KS) type that reproduces patterns commonly observed during the growth of brain microvasculature. We provide mathematical insights into the mechanisms underlying…

Dynamical Systems · Mathematics 2026-05-04 B Ambrosio , A Garroudji , S. Fitzsimons , H Zaag , F. M. Elahi