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We demonstrate how to achieve reversible nonreciprocal optical response in a periodic photonic structure with a pair of defects, one of them being a nonlinear liquid crystal defect layer. The twin defect layers structure is symmetric at low…

We employ ptychography, a phase-retrieval imaging technique, to show experimentally for the first time that a partially coherent high-energy matter (electron) wave emanating from an extended source can be decomposed into a set of mutually…

Mesoscale and Nanoscale Physics · Physics 2017-01-04 S. Cao , P. Kok , P. Li , A. M. Maiden , J. M. Rodenburg

Photothermal spectroscopy and microscopy provides a route to measure the spectral and spatial properties of individual nanoscopic absorbers, independent from scattering, extinction, and emission. The approach relies upon use of two light…

Optics · Physics 2021-04-12 Harrison J. Goldwyn , Stephan Link , David J. Masiello

Organic molecules with nonlinear optical behavior have advanced a wide range of fields spanning from integrated photonics to biological imaging. With advances in microscopy, an emerging application is multifunctional nonlinear organic…

Photoactive proteins absorb light and undergo structural changes that enable them to perform essential biological functions. These proteins are critical for understanding light-induced biological processes, making them important in…

Chemical Physics · Physics 2025-03-28 Sylwia Czach , Jakub Rydzewski , Wiesław Nowak

In this paper we focus on learning optimized partial differential equation (PDE) models for image filtering. In this approach, the grey-scaled images are represented by a vector field of two real-valued functions and the image restoration…

Numerical Analysis · Mathematics 2019-07-12 Sílvia Barbeiro , Diogo Lobo

A proof-of-concept framework for identifying molecules of unknown elemental composition and structure using experimental rotational data and probabilistic deep learning is presented. Using a minimal set of input data determined…

Chemical Physics · Physics 2020-07-01 Michael C. McCarthy , Kin Long Kelvin Lee

It has been argued that in atomic-resolution transmission electron microscopy (TEM) of sparse weakly scattering structures, such as small biological molecules, multiple electron scattering usually has only a small effect, while the…

Optics · Physics 2021-11-16 T. E. Gureyev , H. M. Quiney , A. Kozlov , D. M. Paganin , G. Schmalz , L. J. Allen

Stem cells are characterized by their ability to self-renew, as well as to differentiate and give rise to new populations of cells. Stem cell divisions are crucial for generative processes that occur during early development, and later in…

Applications · Statistics 2025-08-29 Haim Bar , Huyen Nguyen , Joanne Conover

RNA function crucially depends on its structure. Thermodynamic models currently used for secondary structure prediction rely on computing the partition function of folding ensembles, and can thus estimate minimum free-energy structures and…

Biomolecules · Quantitative Biology 2022-07-26 Nicola Calonaci , Alisha Jones , Francesca Cuturello , Michael Sattler , Giovanni Bussi

We explore the conductance of self-healing materials as a measure of the material integrity in the regime of the onset of the initial fatigue. Continuum effective-field modeling and lattice numerical simulations are reported. Our results…

Materials Science · Physics 2010-10-12 Alexander Dementsov , Vladimir Privman

We investigate irreversibility and dissipation in single molecules that cooperatively fold/unfold in a two state manner under the action of mechanical force. We apply path thermodynamics to derive analytical expressions for the average…

Statistical Mechanics · Physics 2009-02-25 Maria Manosas , Alessandro Mossa , Nuria Forns , Josep Maria Huguet , Felix Ritort

A fundamental assumption in our understanding of material rheology is that when microscopic deformations are reversible, the material responds elastically to external loads. Plasticity, i.e. dissipative and irreversible macroscopic changes…

Soft Condensed Matter · Physics 2009-11-13 M. Lundberg , K. Krishan , N. Xu , C. S. O'Hern , M. Dennin

The long-time dynamics of the 1D contact process suddenly brought out of an uncorrelated initial state is studied through a light-cone transfer-matrix renormalisation group approach. At criticality, the system undergoes ageing which is…

Statistical Mechanics · Physics 2007-05-23 Tilman Enss , Malte Henkel , Alan Picone , Ulrich Schollwöck

A numerical method based on the transfer matrix technique is developed to calculate the luminescence spectra of complex layered structures with photon recycling. Using this method we show a strong dependence of the emission spectra on the…

Materials Science · Physics 2015-06-24 V. V. Nikolaev , M. E. Portnoi , I. Eliashevich

The influence of thickness gradient and structural order on the spectral response of opal photonic crystals (PhCs) grown by evaporation-induced self-assembly (EISA) are presented. SEM imaging and angle resolved optical transmission…

Optics · Physics 2023-12-13 Alex Grant , Colm O'Dwyer

In this article we review classical and recent results in anomalous diffusion and provide mechanisms useful for the study of the fundamentals of certain processes, mainly in condensed matter physics, chemistry and biology. Emphasis will be…

Statistical Mechanics · Physics 2019-02-25 Fernando A. Oliveira , Rogelma M. S. Ferreira , Luciano C. Lapas , Mendeli H. Vainstein

Modern technology for producing extremely bright and coherent X-ray laser pulses provides the possibility to acquire a large number of diffraction patterns from individual biological nanoparticles, including proteins, viruses, and DNA.…

Methodology · Statistics 2018-07-11 Stefan Engblom , Carl Nettelblad , Jing Liu

The photoluminescence decay in amorphous semiconductors is described by power law $t^{-delta}$ at long times. The power-law decay of photoluminescence at long times is commonly observed but recent experiments have revealed that the…

Materials Science · Physics 2009-11-11 Kazuhiko Seki , K. Murayama , M. Tachiya

We report methods for correcting the photoluminescence emission and excitation spectra of highly absorbing samples for re-absorption and inner filter effects. We derive the general form of the correction, and investigate various methods for…

Biological Physics · Physics 2015-06-26 Jennifer Riesz , Joel Gilmore , Paul Meredith
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