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A new numerical characterization of symbolic sequences is proposed. The partition of sequence based on Ke and Tong algorithm is a starting point. Algorithm decomposes original sequence into set of distinct subsequences - a patterns. The set…

Quantitative Methods · Quantitative Biology 2011-09-08 B. Kozarzewski

Motivation: DNA data is transcribed into single-stranded RNA, which folds into specific molecular structures. In this paper we pose the question to what extent sequence- and structure-information correlate. We view this correlation as…

Combinatorics · Mathematics 2016-08-23 Christopher Barrett , Fenix W. Huang , Christian M. Reidys

We recall the main features of the Td (tetrahedral) symmetry in atomic nuclei and present realistic mean-field calculations supporting the existence such a symmetry all over the nuclear chart. A few potential candidate-nuclei are…

Nuclear Theory · Physics 2009-11-10 N. Schunck , J. Dudek

We prove the existence of the limiting spectral distribution (LSD) of symmetric triangular patterned matrices and also establish the joint convergence of sequences of such matrices. For the particular case of the symmetric triangular Wigner…

Probability · Mathematics 2012-04-12 Riddhipratim Basu , Arup Bose , Shirshendu Ganguly , Rajat Subhra Hazra

Recent progress is reviewed regarding the application of the non-Abelian symmetries S_3, D_4, and A_4 to the understanding of family structure in leptons and quarks.

High Energy Physics - Phenomenology · Physics 2007-05-23 Ernest Ma

We study semiparametric time series models with innovations following a log-concave distribution. We propose a general maximum likelihood framework which allows us to estimate simultaneously the parameters of the model and the density of…

Methodology · Statistics 2018-01-30 Yining Chen

A new continuous classification system for BL Lacertae (BL Lac) objects is proposed. The peak frequency of the synchrotron component in the $\nu L_{\nu}$ spectrum is used as a classifying parameter. The application of the accelerating inner…

Astrophysics · Physics 2007-05-23 Markos Georganopoulos , Alan P. Marscher

A new method to identify all sufficiently long repeating substrings in one or several symbol sequences is proposed. The method is based on a specific gauge applied to symbol sequences that guarantees identification of the repeating…

Genomics · Quantitative Biology 2016-04-07 Sergey Tsarev , Michael Sadovsky

A new family of compound Poisson distribution functions from statistical linguistic is used to study the n-tuples and nucleotide composition features of DNA sequences. The relative frequency distribution of the 6-tuples and 7- tuples…

Statistical Mechanics · Physics 2007-05-23 K. L. Ng , S. P. Li

By a classical principle of analysis, sufficiently thin subsequences of general sequences of functions behave like sequences of independent random variables. This observation not only explains the remarkable properties of lacunary…

Number Theory · Mathematics 2014-01-13 Christoph Aistleitner , Istvan Berkes , Robert Tichy

The aim of the article is to understand the combinatorics of snake graphs by means of linear algebra. In particular, we apply Kasteleyn's and Temperley--Fisher's ideas about spectral properties of weighted adjacency matrices of planar…

Combinatorics · Mathematics 2019-10-28 James P. Bradshaw , Philipp Lampe , Dusan Ziga

Spectral properties of Hermitian Toeplitz, Hankel, and Toeplitz-plus-Hankel random matrices with independent identically distributed entries are investigated. Combining numerical and analytic arguments it is demonstrated that spectral…

Mathematical Physics · Physics 2021-04-28 Eugene Bogomolny , Olivier Giraud

Symmetry breaking for graphs and other combinatorial objects is notoriously hard. On the one hand, complete symmetry breaks are exponential in size. On the other hand, current, state-of-the-art, partial symmetry breaks are often considered…

Logic in Computer Science · Computer Science 2026-04-01 Michael Codish , Mikoláš Janota

We investigate the iterative construction of discrete Laplacians on 2D square lattices, revealing emergent fractal-like patterns shaped by modular arithmetic. While classical 2222-style iterations reproduce known structures such as the…

Dynamical Systems · Mathematics 2026-03-16 Małgorzata Nowak-Kępczyk

This work uses the L-system to construct a tree structure for the text sequence and derives its complexity. It serves as a measure of structural complexity of the text. It is applied to anomaly detection in data transmission.

Artificial Intelligence · Computer Science 2013-07-03 Cheng-Yuan Liou , Bo-Shiang Huang , Daw-Ran Liou , Alex A. Simak

Silicene, a sheet of silicon atoms in a honeycomb lattice, was proposed to be a new Dirac-type electron system similar as graphene. We performed scanning tunneling microscopy and spectroscopy studies on the atomic and electronic properties…

Mesoscale and Nanoscale Physics · Physics 2015-06-04 Lan Chen , Cheng-Cheng Liu , Baojie Feng , Xiaoyue He , Peng Cheng , Zijing Ding , Sheng Meng , Yugui Yao , Kehui Wu

Treschev made the remarkable discovery that there exists formal power series describing a billiard with locally linearizable dynamics. We show that if the frequency for the linear dynamics is Diophanine, the Treschev example is $(1+…

Dynamical Systems · Mathematics 2022-11-08 Qun Wang , Ke Zhang

The speckle statistics of optical coherence tomography images of biological tissue have been studied using several historical probability density functions. A recent hypothesis implies that underlying power-law distributions in the medium…

Medical Physics · Physics 2021-02-01 Gary R. Ge , Jannick P. Rolland , Kevin J. Parker

Latin squares have been historically used in order to create statistical designs in which, starting from a small number of experiments, it can be obtained a large experimental space. In this sense, the optimization of the selection of Latin…

Combinatorics · Mathematics 2011-05-06 R. M. Falcón

A major problem for inferring species trees from gene trees is that evolutionary processes can sometimes favour gene tree topologies that conflict with an underlying species tree. In the case of incomplete lineage sorting, this phenomenon…

Populations and Evolution · Quantitative Biology 2012-12-03 Mike Steel , Simone Linz , Daniel H. Huson , Michael J. Sanderson