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Related papers: Mining DNA Sequences Based on Spatially Coded Tech…

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Optical mapping by direct visualization of individual DNA molecules, stretched in nanochannels with sequence-specific fluorescent labeling, represents a promising tool for disease diagnostics and genomics. An important challenge for this…

Quantitative Methods · Quantitative Biology 2015-01-21 Charleston Noble , Adam N. Nilsson , Camilla Freitag , Jason P. Beech , Jonas O. Tegenfeldt , Tobias Ambjörnsson

Semantic segmentation is a critical step in automated image interpretation and analysis where pixels are classified into one or more predefined semantically meaningful classes. Deep learning approaches for semantic segmentation rely on…

Computer Vision and Pattern Recognition · Computer Science 2023-07-10 Tushar Kataria , Beatrice Knudsen , Shireen Elhabian

Evolutionary computation methods have been successfully applied to neural networks since two decades ago, while those methods cannot scale well to the modern deep neural networks due to the complicated architectures and large quantities of…

Neural and Evolutionary Computing · Computer Science 2019-03-12 Yanan Sun , Bing Xue , Mengjie Zhang , Gary G. Yen

Spatial transcriptomics (ST) provides essential spatial context by mapping gene expression within tissue, enabling detailed study of cellular heterogeneity and tissue organization. However, aligning ST data with histology images poses…

In this paper, we propose a novel conservative chaotic standard map-driven dynamic DNA coding (encoding, addition, subtraction and decoding) for the image encryption. The proposed image encryption algorithm is a dynamic DNA coding algorithm…

Cryptography and Security · Computer Science 2023-10-24 Vinod Patidar , Gurpreet Kaur

Diffuse optical imaging (DOI) offers valuable insights into scattering mediums, but the quest for high-resolution imaging often requires dense sampling strategies, leading to higher imaging errors and lengthy acquisition times. This work…

Optics · Physics 2025-04-07 Ben Wiesel , Shlomi Arnon

Purpose: To introduce a novel deep learning based approach for fast and high-quality dynamic multi-coil MR reconstruction by learning a complementary time-frequency domain network that exploits spatio-temporal correlations simultaneously…

Image and Video Processing · Electrical Eng. & Systems 2021-06-21 Chen Qin , Jinming Duan , Kerstin Hammernik , Jo Schlemper , Thomas Küstner , René Botnar , Claudia Prieto , Anthony N. Price , Joseph V. Hajnal , Daniel Rueckert

Object co-segmentation is to segment the shared objects in multiple relevant images, which has numerous applications in computer vision. This paper presents a spatial and semantic modulated deep network framework for object co-segmentation.…

Computer Vision and Pattern Recognition · Computer Science 2019-12-02 Kaihua Zhang , Jin Chen , Bo Liu , Qingshan Liu

We propose a new information aggregation method which called Localized Feature Aggregation Module based on the similarity between the feature maps of an encoder and a decoder. The proposed method recovers positional information by…

Image and Video Processing · Electrical Eng. & Systems 2021-12-06 Ryouichi Furukawa , Kazuhiro Hotta

Symbolic regression (SR) aims to discover mathematical expressions from data, a task traditionally tackled using Genetic Programming (GP) through combinatorial search over symbolic structures. Latent Space Optimization (LSO) methods use…

Neural and Evolutionary Computing · Computer Science 2026-04-14 Benjamin Léger , Kazem Meidani , Christian Gagné

Finding a template in a search image is an important task underlying many computer vision applications. Recent approaches perform template matching in a deep feature-space, produced by a convolutional neural network (CNN), which is found to…

Computer Vision and Pattern Recognition · Computer Science 2021-05-10 Bo Gao , M. W. Spratling

Higher-order tensors have received increased attention across science and engineering. While most tensor decomposition methods are developed for a single tensor observation, scientific studies often collect side information, in the form of…

Methodology · Statistics 2021-10-29 Jiaxin Hu , Chanwoo Lee , Miaoyan Wang

A Convolutional Neural Network architecture was used to classify various isotopes of time-sequenced gamma-ray spectra, a typical output of a radiation detection system of a type commonly fielded for security or environmental measurement…

Applied Physics · Physics 2019-08-30 Eric T. Moore , William P. Ford , Emma J. Hague , Johanna Turk

Deep learning has proven to successfully learn variations in tissue and cell morphology. Training of such models typically relies on expensive manual annotations. Here we conjecture that spatially resolved gene expression, e.i., the…

Quantitative Methods · Quantitative Biology 2023-12-11 Axel Andersson , Gabriele Partel , Leslie Solorzano , Carolina Wählby

Learned image compression methods have shown superior rate-distortion performance and remarkable potential compared to traditional compression methods. Most existing learned approaches use stacked convolution or window-based self-attention…

Image and Video Processing · Electrical Eng. & Systems 2024-01-03 Huairui Wang , Nianxiang Fu , Zhenzhong Chen , Shan Liu

Dynamic mode decomposition (DMD) is a leading tool for equation-free analysis of high-dimensional dynamical systems from observations. In this work, we focus on a combination of delay-coordinates embedding and DMD, i.e., delay-coordinates…

Dynamical Systems · Mathematics 2022-12-21 Emil Bronstein , Aviad Wiegner , Doron Shilo , Ronen Talmon

With the advancement in technology, digital images can easily be transmitted and stored over the Internet. Encryption is used to avoid illegal interception of digital images. Encrypting large-sized colour images in their original dimension…

This paper is focused in designing an efficient on-line algorithm to reconstruct a DNA sequence and search the genes in it, we assume that the segment have no mutation or reading error, the algorithm is based on de Bruijn Graph for…

Data Structures and Algorithms · Computer Science 2017-06-12 Juan David Arcila Moreno , Santiago Passos , Mauricio Toro

This paper presents a semi-supervised hyperspectral unmixing solution that integrate the spatial information in the abundance estimation procedure. The proposed method is applied on a nonlinear model based on polynomial postnonlinear mixing…

Signal Processing · Electrical Eng. & Systems 2018-03-05 Fahime Amiri , Mohammad Hossein. Kahaei

This paper proposes a probabilistic motion prediction method for long motions. The motion is predicted so that it accomplishes a task from the initial state observed in the given image. While our method evaluates the task achievability by…

Computer Vision and Pattern Recognition · Computer Science 2024-03-08 Takeru Oba , Norimichi Ukita