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Long scan duration remains a challenge for high-resolution MRI. Deep learning has emerged as a powerful means for accelerated MRI reconstruction by providing data-driven regularizers that are directly learned from data. These data-driven…

Image and Video Processing · Electrical Eng. & Systems 2020-09-09 Seyed Amir Hossein Hosseini , Burhaneddin Yaman , Steen Moeller , Mehmet Akçakaya

Cardiac cine magnetic resonance imaging (MRI) is one of the important means to assess cardiac functions and vascular abnormalities. Mitigating artifacts arising during image reconstruction and accelerating cardiac cine MRI acquisition to…

Image and Video Processing · Electrical Eng. & Systems 2024-07-03 Xiaoxiang Han , Yang Chen , Qiaohong Liu , Yiman Liu , Keyan Chen , Yuanjie Lin , Weikun Zhang

AI-based neural decoding reconstructs visual perception by leveraging generative models to map brain activity, measured through functional MRI (fMRI), into latent hierarchical representations. Traditionally, ridge linear models transform…

Image and Video Processing · Electrical Eng. & Systems 2025-09-04 Lorenzo Veronese , Andrea Moglia , Luca Mainardi , Pietro Cerveri

Advances in neuroimaging techniques have provided us novel insights into understanding how the human mind works. Functional magnetic resonance imaging (fMRI) is the most popular and widely used neuroimaging technique, and there is growing…

Neurons and Cognition · Quantitative Biology 2022-06-15 Jihyun Hur , Jaeyeong Yang , Hoyoung Doh , Woo-Young Ahn

Research in many fields has shown that transfer learning (TL) is well-suited to improve the performance of deep learning (DL) models in datasets with small numbers of samples. This empirical success has triggered interest in the application…

Neurons and Cognition · Quantitative Biology 2021-11-03 Armin W. Thomas , Ulman Lindenberger , Wojciech Samek , Klaus-Robert Müller

Neural networks have emerged as a powerful tool for modeling physical systems, offering the ability to learn complex representations from limited data while integrating foundational scientific knowledge. In particular, neuro-symbolic…

Machine Learning · Computer Science 2025-07-30 Wenkai Tan , Alvaro Velasquez , Houbing Song

Brain decoding algorithms form an important part of the arsenal of analysis tools available to neuroscientists, allowing for a more detailed study of the kind of information represented in patterns of cortical activity. While most current…

Quantitative Methods · Quantitative Biology 2017-08-17 R. S. van Bergen , J. F. M. Jehee

Human brains exhibit highly organized multiscale neurophysiological dynamics. Understanding those dynamic changes and the neuronal networks involved is critical for understanding how the brain functions in health and disease. Functional…

Neurons and Cognition · Quantitative Biology 2024-09-09 Manuel Morante , Kristian Frølich , Naveed ur Rehman

Mental disorders are among the most widespread diseases globally. Analyzing functional brain networks through functional magnetic resonance imaging (fMRI) is crucial for understanding mental disorder behaviors. Although existing fMRI-based…

Neural and Evolutionary Computing · Computer Science 2025-05-26 Jun-En Ding , Dongsheng Luo , Anna Zilverstand , Kaustubh Kulkarni , Feng Liu

Functional MRI (fMRI) has become the most common method for investigating the human brain. However, fMRI data present some complications for statistical analysis and modeling. One recently developed approach to these data focuses on…

Applications · Statistics 2015-03-19 Vincent Q. Vu , Pradeep Ravikumar , Thomas Naselaris , Kendrick N. Kay , Jack L. Gallant , Bin Yu

Neural encoding models aim to predict fMRI-measured brain responses to natural images. fMRI data is acquired as a 3D volume of voxels, where each voxel has a defined spatial location in the brain. However, conventional encoding models often…

Neurons and Cognition · Quantitative Biology 2026-02-11 Haomiao Chen , Keith W Jamison , Mert R. Sabuncu , Amy Kuceyeski

Convolutional Neural Networks (CNNs) are highly effective for image reconstruction problems. Typically, CNNs are trained on large amounts of training images. Recently, however, un-trained CNNs such as the Deep Image Prior and Deep Decoder…

Image and Video Processing · Electrical Eng. & Systems 2021-04-29 Mohammad Zalbagi Darestani , Reinhard Heckel

Existing learning approaches to dexterous manipulation use demonstrations or interactions with the environment to train black-box neural networks that provide little control over how the robot learns the skills or how it would perform post…

Robotics · Computer Science 2023-01-25 Abhineet Jain , Jack Kolb , Harish Ravichandar

Magnetic resonance imaging (MRI) has played a crucial role in fetal neurodevelopmental research. Structural annotations of MR images are an important step for quantitative analysis of the developing human brain, with Deep Learning providing…

Fast and accurate reconstruction of magnetic resonance (MR) images from under-sampled data is important in many clinical applications. In recent years, deep learning-based methods have been shown to produce superior performance on MR image…

Image and Video Processing · Electrical Eng. & Systems 2021-03-12 Pengfei Guo , Puyang Wang , Jinyuan Zhou , Shanshan Jiang , Vishal M. Patel

In recent years, the rapid development of neuroimaging technology has been providing many powerful tools for cognitive neuroscience research. Among them, the functional magnetic resonance imaging (fMRI), which has high spatial resolution,…

Human-Computer Interaction · Computer Science 2018-08-20 Yang Wang , Dongrui Wu

Aggregating multi-subject functional magnetic resonance imaging (fMRI) data is indispensable for generating valid and general inferences from patterns distributed across human brains. The disparities in anatomical structures and functional…

Machine Learning · Computer Science 2019-11-20 Weida Li , Mingxia Liu , Fang Chen , Daoqiang Zhang

Real-time fMRI neurofeedback (rtfMRI-nf) is an emerging approach for studies and novel treatments of major depressive disorder (MDD). EEG performed simultaneously with an rtfMRI-nf procedure allows an independent evaluation of rtfMRI-nf…

The aim of this work is to present a mathematical framework for the study of flickering inputs in visual processing tasks. When combined with geometric patterns, these inputs influence and induce interesting psychophysical phenomena, such…

Neurons and Cognition · Quantitative Biology 2025-07-17 Maria Virginia Bolelli , Dario Prandi

Magnetic Resonance Fingerprinting (MRF) is an imaging technique acquiring unique time signals for different tissues. Although the acquisition is highly accelerated, the reconstruction time remains a problem, as the state-of-the-art template…

Image and Video Processing · Electrical Eng. & Systems 2019-09-17 Elisabeth Hoppe , Florian Thamm , Gregor Körzdörfer , Christopher Syben , Franziska Schirrmacher , Mathias Nittka , Josef Pfeuffer , Heiko Meyer , Andreas Maier