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Functional data, representing curves or trajectories, are ubiquitous in fields like biomedicine and motion analysis. A fundamental challenge is phase variability -- temporal misalignments that obscure underlying patterns and degrade model…

Computer Vision and Pattern Recognition · Computer Science 2025-09-30 Siyuan Jiang , Yihan Hu , Wenjie Li , Pengcheng Zeng

Feature learning is widely regarded as the key mechanism distinguishing neural networks from fixed-kernel methods, yet its impact on the induced function space remains poorly understood. In this work, we precisely characterize how the…

Machine Learning · Statistics 2026-05-19 João Lobo , Bruno Loureiro , Long Tran-Than , Fanghui Liu

Image noise and motion artifacts greatly affect the quality of brain MRI and negatively influence downstream medical image analysis. Previous studies often focus on 2D methods that process each volumetric MR image slice-by-slice, thus…

Image and Video Processing · Electrical Eng. & Systems 2024-03-14 Lintao Zhang , Mengqi Wu , Lihong Wang , David C. Steffens , Guy G. Potter , Mingxia Liu

Understanding the neural basis of behavior is a fundamental goal in neuroscience. Current research in large-scale neuro-behavioral data analysis often relies on decoding models, which quantify behavioral information in neural data but lack…

Neurons and Cognition · Quantitative Biology 2024-11-27 Yule Wang , Chengrui Li , Weihan Li , Anqi Wu

Predicting future brain state from a baseline magnetic resonance image (MRI) is a central challenge in neuroimaging and has important implications for studying neurodegenerative diseases such as Alzheimer's disease (AD). Most existing…

Computer Vision and Pattern Recognition · Computer Science 2026-05-28 Ali Farki , Elaheh Moradi , Deepika Koundal , Jussi Tohka

Although functional magnetic resonance imaging (fMRI) is widely used for the study of brain functions, the blood oxygenation level dependent (BOLD) effect is incompletely understood. Particularly, negative BOLD responses(NBRs) is…

Neurons and Cognition · Quantitative Biology 2017-12-12 Hiroshi Tsukimoto , Takefumi Matsubara

Observations from ground based telescopes are affected by the presence of the Earth atmosphere, which severely perturbs them. The use of adaptive optics techniques has allowed us to partly beat this limitation. However, image selection or…

Instrumentation and Methods for Astrophysics · Physics 2021-02-17 A. Asensio Ramos , N. Olspert

A major hurdle to clinical translation of brain-machine interfaces (BMIs) is that current decoders, which are trained from a small quantity of recent data, become ineffective when neural recording conditions subsequently change. We tested…

Neurons and Cognition · Quantitative Biology 2016-12-15 David Sussillo , Sergey D. Stavisky , Jonathan C. Kao , Stephen I. Ryu , Krishna V. Shenoy

Understanding how the brain encodes external stimuli and how these stimuli can be decoded from the measured brain activities are long-standing and challenging questions in neuroscience. In this paper, we focus on reconstructing the complex…

Neurons and Cognition · Quantitative Biology 2022-10-05 Sikun Lin , Thomas Sprague , Ambuj K Singh

Single-subject mapping of resting-state brain functional activity to non-imaging phenotypes is a major goal of neuroimaging. The large majority of learning approaches applied today rely either on static representations or on short-term…

Machine Learning · Computer Science 2022-08-09 Ahmed El-Gazzar , Rajat Mani Thomas , Guido Van Wingen

Exploring the mysteries of the human brain is a long-term research topic in neuroscience. With the help of deep learning, decoding visual information from human brain activity fMRI has achieved promising performance. However, these decoding…

Neurons and Cognition · Quantitative Biology 2024-09-04 Guangyin Bao , Duoqian Miao

Decoding brain imaging data are gaining popularity, with applications in brain-computer interfaces and the study of neural representations. Decoding is typicallysubject-specific and does not generalise well over subjects, due to high…

Machine Learning · Computer Science 2024-01-22 Richard Csaky , Mats Van Es , Oiwi Parker Jones , Mark Woolrich

Adversarial reprogramming allows repurposing a machine-learning model to perform a different task. For example, a model trained to recognize animals can be reprogrammed to recognize digits by embedding an adversarial program in the digit…

Machine Learning · Computer Science 2023-03-14 Yang Zheng , Xiaoyi Feng , Zhaoqiang Xia , Xiaoyue Jiang , Ambra Demontis , Maura Pintor , Battista Biggio , Fabio Roli

Functional magnetic resonance imaging (fMRI) is essential for developing encoding models that identify functional changes in language-related brain areas of individuals with Neurocognitive Disorders (NCD). While large language model…

Neurons and Cognition · Quantitative Biology 2024-07-16 Yuejiao Wang , Xianmin Gong , Lingwei Meng , Xixin Wu , Helen Meng

While computer vision models have made incredible strides in static image recognition, they still do not match human performance in tasks that require the understanding of complex, dynamic motion. This is notably true for real-world…

Neurons and Cognition · Quantitative Biology 2025-04-09 Jacob Yeung , Andrew F. Luo , Gabriel Sarch , Margaret M. Henderson , Deva Ramanan , Michael J. Tarr

Two-dimensional (2D) fast spin echo (FSE) techniques play a central role in the clinical magnetic resonance imaging (MRI) of knee joints. Moreover, three-dimensional (3D) FSE provides high-isotropic-resolution magnetic resonance (MR) images…

Image and Video Processing · Electrical Eng. & Systems 2022-12-15 Shutian Zhao , Donal G. Cahill , Siyue Li , Fan Xiao , Thierry Blu , James F Griffith , Weitian Chen

Deep neural networks have been developed drawing inspiration from the brain visual pathway, implementing an end-to-end approach: from image data to video object classes. However building an fMRI decoder with the typical structure of…

Machine Learning · Statistics 2017-01-10 Michele Svanera , Sergio Benini , Gal Raz , Talma Hendler , Rainer Goebel , Giancarlo Valente

Motor skill acquisition in fields like surgery, robotics, and sports involves learning complex task sequences through extensive training. Traditional performance metrics, like execution time and error rates, offer limited insight as they…

Neurons and Cognition · Quantitative Biology 2025-02-21 Anil Kamat , Rahul Rahul , Lora Cavuoto , Harry Burke , Matthew Hackett , Jack Norfleet , Steven Schwaitzberg , Suvranu De

Deep learning based methods for image reconstruction are state-of-the-art for a variety of imaging tasks. However, neural networks often perform worse if the training data differs significantly from the data they are applied to. For…

Image and Video Processing · Electrical Eng. & Systems 2024-08-08 Kang Lin , Reinhard Heckel

We propose a novel approach to denoising diffusion magnetic resonance images (dMRI) using convolutional neural networks, that exploits the benefits of data acquired at multiple b-values to offset the need for many redundant observations.…

Image and Video Processing · Electrical Eng. & Systems 2024-10-23 Jakub Jurek , Andrzej Materka , Kamil Ludwisiak , Agata Majos , Filip Szczepankiewicz
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