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Reaction-diffusion systems have been widely used to study spatio-temporal phenomena in cell biology, such as cell polarization. Coupled bulk-surface models naturally include compartmentalization of cytosolic and membrane-bound polarity…

Pattern Formation and Solitons · Physics 2020-08-11 Frédéric Paquin-Lefebvre , Bin Xu , Kelsey L. DiPietro , Alan E. Lindsay , Alexandra Jilkine

We study the self-organization of spherical particles in an oscillating flow through experiments inside an oscillating box. The interactions between the particles and the time-averaged (steady streaming) flow lead to the formation of either…

Fluid Dynamics · Physics 2023-05-03 T. J. J. M. van Overveld , H. J. H. Clercx , M. Duran-Matute

Dynamical coherent structure (pattern) formation in the Klein-Gordon lattice excited by periodic external field near the optical resonance is studied. It is shown that besides spatial patterns discovered recently (V.M.Burlakov,…

patt-sol · Physics 2009-10-31 Victor M. Burlakov

In this paper, we investigate the emergence of a predator-prey model with Beddington-DeAngelis-type functional response and reaction-diffusion. We derive the conditions for Hopf and Turing bifurcation on the spatial domain. Based on the…

Populations and Evolution · Quantitative Biology 2008-01-08 Weiming Wang , Lei Zhang , Yakui Xue , Zhen Jin

In this paper, we investigate the boundary layer arising from the fast internal waves in the Boussinesq equations with the Brunt-Vais\"al\"a frequency of order $ \mathcal O(1/\varepsilon) $. For the homogeneous-in-height stratification,…

Analysis of PDEs · Mathematics 2024-01-01 Rupert Klein , Xin Liu

Spatio-temporal signals arising from event-driven biological processes, such as surface electromyography (sEMG), exhibit asynchronous and highly structured activation patterns that are challenging to model using conventional discrete or…

Machine Learning · Computer Science 2026-05-05 Magnus Bengtsson

The study of pattern emergence together with exploration of the exemplar Turing model is enjoying a renaissance both from theoretical and experimental perspective. Here, we implement a stability analysis of spatially dependent reaction…

Pattern Formation and Solitons · Physics 2019-11-06 Michal Kozák , Eamonn A Gaffney , Václav Klika

Sticky diffusion processes on bounded domains spend finite time (and finite mean time) on the lower-dimensional space given by the boundary. Once the process hits the boundary, then it starts again after a random amount of time. While on…

Probability · Mathematics 2026-05-19 Mirko D'Ovidio

We discuss the identification of a time-dependent potential in a time-fractional diffusion model from a boundary measurement taken at a single point. Theoretically, we establish a conditional Lipschitz stability for this inverse problem.…

Numerical Analysis · Mathematics 2024-07-23 Siyu Cen , Kwancheol Shin , Zhi Zhou

We derive an equation that governs the spatiotemporal dynamics of small amplitude alternans in paced cardiac tissue. We show that a pattern-forming linear instability leads to the spontaneous formation of stationary or traveling waves whose…

Statistical Mechanics · Physics 2009-11-07 Blas Echebarria , Alain Karma

Spatial profiling technologies in biology, such as imaging mass cytometry (IMC) and spatial transcriptomics (ST), generate high-dimensional, multi-channel data with strong spatial alignment and complex inter-channel relationships.…

Machine Learning · Computer Science 2025-07-08 Haoran Zhang , Mingyuan Zhou , Wesley Tansey

We propose a novel mechanism leading to spatiotemporal oscillations in extended systems that does not rely on local bulk instabilities. Instead, oscillations arise from the interaction of two subsystems of different spatial dimensionality.…

Other Condensed Matter · Physics 2007-05-23 A. Gomez-Marin , J. Garcia-Ojalvo , J. M. Sancho

Turbulent flows have historically presented formidable challenges to predictive computational modeling. Traditional numerical simulations often require vast computational resources, making them infeasible for numerous engineering…

Fluid Dynamics · Physics 2023-11-15 Han Gao , Xu Han , Xiantao Fan , Luning Sun , Li-Ping Liu , Lian Duan , Jian-Xun Wang

We introduce a non-diffusive spatial coupling term into the replicator equation of evolutionary game theory. The spatial flux is based on motion due to local gradients in the relative fitness of each strategy, providing a game-dependent…

Pattern Formation and Solitons · Physics 2015-06-12 Russ deForest , Andrew Belmonte

Motivated by investigating spatio-temporal patterns of the distribution of continuous variables, we consider describing the conditional distribution function of the response variable incorporating spatio-temporal components given…

In this work, we introduce two spatio-temporal colored bounded noises, based on the zero-dimensional Cai-Lin and Tsallis-Borland noises. We then study and characterize the dependence of the defined bounded noises on both a temporal…

Statistical Mechanics · Physics 2015-03-20 Sebastiano de Franciscis , Alberto d'Onofrio

We propose a time-domain boundary integral method to model linear wave propagation with refractive, focusing, and Doppler effects arising from medium heterogeneities and moving obstacles. In contrast to existing techniques, our method…

Numerical Analysis · Mathematics 2026-05-13 Raaghav Ramani

Building on the phase reduction theory formulated for reaction-diffusion systems with spatial translational symmetry, we develop a data-driven method that reconstructs the spatiotemporal phase dynamics of traveling and oscillating patterns.…

Adaptation and Self-Organizing Systems · Physics 2026-04-28 Takahiro Arai , Toshio Aoyagi , Yoji Kawamura

In diverse physical systems stable oscillatory solutions devolve into more complicated dynamical behaviour through border-collision bifurcations. Mathematically these occur when a stable fixed point of a piecewise-smooth map collides with a…

Dynamical Systems · Mathematics 2022-07-22 David J. W. Simpson

The interplay between space and evolution is an important issue in population dynamics, that is in particular crucial in the emergence of polymorphism and spatial patterns. Recently, biological studies suggest that invasion and evolution…

Probability · Mathematics 2016-08-16 Nicolas Champagnat , Sylvie Méléard