Related papers: Complete intersection for equivariant models

We study the problem of finding elements in the intersection of an arbitrary conic variety in $\mathbb{F}^n$ with a given linear subspace (where $\mathbb{F}$ can be the real or complex field). This problem captures a rich family of…

We consider the level-sets of continuous Gaussian fields on $\mathbb{R}^d$ above a certain level $-\ell\in \mathbb{R}$, which defines a percolation model as $\ell$ varies. We assume that the covariance kernel satisfies certain regularity,…

We introduce techniques of Suslin, Voevodsky, and others into the study of singular varieties. Our approach is modeled after Goresky-MacPherson intersection homology. We provide a formulation of perversity cycle spaces leading to perversity…

Phylogenetic networks are generalizations of phylogenetic trees that allow the representation of reticulation events such as horizontal gene transfer or hybridization, and can also represent uncertainty in inference. A subclass of these,…

With the help of Generalized Estimating Equations, we identify locally D-optimal crossover designs for generalized linear models. We adopt the variance of parameters of interest as the objective function, which is minimized using…

We consider the following conjecture: if X is a smooth projective variety over a field of characteristic zero, then there is a dense set of reductions X_s of X to positive characteristic such that the action of the Frobenius morphism on the…

The rich and varied ways that genetic material can be passed between species has motivated extensive research into the theory of phylogenetic networks. Features that align with biological processes, or with desirable mathematical…

We advertise elementary symmetric polynomials $e_i$ as the natural basis for generating series $A_{g,n}$ of intersection numbers of genus g and n marked points. Closed formulae for $A_{g,n}$ are known for genera $0$ and $1$ -- this approach…

We derive a Poisson random field model for population site polymorphisms differences within and between two species that share a relatively recent common ancestor. The model can be either equilibrium or time inhomogeneous. We first consider…

We introduce a notion of finite sampling consistency for phylogenetic trees and show that the set of finitely sampling consistent and exchangeable distributions on n leaf phylogenetic trees is a polytope. We use this polytope to show that…

Let $X$ be a smooth irreducible projective variety of dimension at least 2 over an algebraically closed field of characteristic 0 in the projective space ${\mathbb{P}}^n$. Bertini's Theorem states that a general hyperplane $H$ intersects…

We derive exact formulae for the allele frequency spectrum under the coalescent with mutation, conditioned on allele counts at some fixed time in the past. We consider unlinked biallelic markers mutating according to a finite sites, or…

Nonlinearity and non-Hermiticity, for example due to environmental gain-loss processes, are a common occurrence throughout numerous areas of science and lie at the root of many remarkable phenomena. For the latter, parity-time-reflection…

We introduce a special class of real semiflows, which is used to define a general type of evolution semigroups, associated to not necessarily exponentially bounded evolution families. Giving spectral characterizations of the corresponding…

The maximum parsimony phylogenetic tree reconstruction problem is NP-hard, presenting a computational bottleneck for classical computing and motivating the exploration of emerging paradigms like quantum computing. To this end, we design…

Let $X$ be a quasi projective scheme over a noetherian affine scheme $Spec(A)$, $U\subseteq X$ be an open subset, and $Z=X-U$.Assume that $Z$ is complete intersection, with $k=codim Z$. Consider the map $$ q:{\mathbb K}\left({\mathscr…

The spectacular success of deep generative models calls for quantitative tools to measure their statistical performance. Divergence frontiers have recently been proposed as an evaluation framework for generative models, due to their ability…

Phylogenetics is now fundamental in life sciences, providing insights into the earliest branches of life and the origins and spread of epidemics. However, finding suitable phylogenies from the vast space of possible trees remains…

We are interested in modelling Darwinian evolution, resulting from the interplay of phenotypic variation and natural selection through ecological interactions. Our models are rooted in the microscopic, stochastic description of a population…

We introduce a simple algorithm for reconstructing phylogenies from multiple gene trees in the presence of incomplete lineage sorting, that is, when the topology of the gene trees may differ from that of the species tree. We show that our…