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Related papers: Maximizing diversity in biology and beyond

200 papers

Aging is a universal consequence of life, yet researchers have identified no universal theme. This manuscript considers aging from the perspective of entropy, wherein things fall apart. We first examine biological information change as a…

Populations and Evolution · Quantitative Biology 2026-04-13 Stephan Baehr , Hans Baehr

This paper explores the enhancement of solution diversity in evolutionary algorithms (EAs) for the maximum matching problem, concentrating on complete bipartite graphs and paths. We adopt binary string encoding for matchings and use Hamming…

Neural and Evolutionary Computing · Computer Science 2024-04-19 Jonathan Gadea Harder , Aneta Neumann , Frank Neumann

This paper addresses the problem of quantifying diversity for a set of objects. First, we conduct a systematic review of existing diversity measures and explore their undesirable behavior in certain cases. Based on this review, we formulate…

Machine Learning · Computer Science 2025-06-17 Mikhail Mironov , Liudmila Prokhorenkova

We propose a method for transforming probability distributions so that parameters of interest are forced into a specified distribution. We prove that this approach is the maximum entropy choice, and provide a motivating example applicable…

Statistics Theory · Mathematics 2019-03-13 Will Handley , Marius Millea

We present a general holistic theory for the organization of complex networks, both human-engineered and naturally-evolved. Introducing concepts of value of interactions and satisfaction as generic network performance measures, we show that…

Adaptation and Self-Organizing Systems · Physics 2007-07-13 Venkat Venkatasubramanian , Dimitris N. Politis , Priyan R. Patkar

Entropy maximization procedure has been a general practice in many diverse fields of science to obtain the concomitant probability distributions. The consistent use of the maximization procedure on the other hand requires the probability…

Statistical Mechanics · Physics 2018-10-17 Thomas Oikonomou , G. Baris Bagci

Maximum diversity aims at selecting a diverse set of high-quality objects from a collection, which is a fundamental problem and has a wide range of applications, e.g., in Web search. Diversity under a uniform or partition matroid constraint…

Data Structures and Algorithms · Computer Science 2021-04-13 Guangyi Zhang , Aristides Gionis

The three-parameter generalized extreme value distribution arises from classical univariate extreme value theory and is in common use for analyzing the far tail of observed phenomena. Curiously, important asymptotic properties of…

Statistics Theory · Mathematics 2020-08-17 Likun Zhang , Benjamin Shaby

Promoting and maintaining diversity of candidate solutions is a key requirement of evolutionary algorithms in general and multi-objective evolutionary algorithms in particular. In this paper, we use the recently developed theory of…

Neural and Evolutionary Computing · Computer Science 2023-03-15 Steve Huntsman

We show that the natural scaling of measurement for a particular problem defines the most likely probability distribution of observations taken from that measurement scale. Our approach extends the method of maximum entropy to use…

Quantitative Methods · Quantitative Biology 2010-03-02 Steven A. Frank , D. Eric Smith

This is the second of two papers dedicated to the relationship between population models of competition and biodiversity. Here we consider species assembly models where the population dynamics is kept far from fixed points through the…

Populations and Evolution · Quantitative Biology 2007-05-23 Ugo Bastolla , Michael Lässig , Susanna C. Manrubia , Angelo Valleriani

In addition to the well known common properties such as small world and community structures, recent empirical investigations suggest a universal scaling law for the spatial structure of social networks. It is found that the probability…

Physics and Society · Physics 2010-02-10 Yanqing Hu , Yougui Wang , Daqing Li , Shlomo Havlin , Zengru Di

Numerous genotypic diversity measures (GDMs) are available in the literature to assess the convergence status of an evolutionary algorithm (EA) or describe its search behavior. In a recent study, the authors of this paper drew attention to…

Neural and Evolutionary Computing · Computer Science 2015-07-02 Guillaume Corriveau , Raynald Guilbault , Antoine Tahan , Robert Sabourin

Entropy and differential entropy are important quantities in information theory. A tractable extension to singular random variables-which are neither discrete nor continuous-has not been available so far. Here, we present such an extension…

Information Theory · Computer Science 2017-01-04 Günther Koliander , Georg Pichler , Erwin Riegler , Franz Hlawatsch

On a compact group the Haar probability measure plays the role of uniform distribution. The entropy and rate distortion theory for this uniform distribution is studied. New results and simplified proofs on convergence of convolutions on…

Information Theory · Computer Science 2010-05-27 Peter Harremoes

Phylogenies are commonly used to represent the evolutionary relationships between species, and often these phylogenies are equipped with edge lengths that indicate degrees of evolutionary difference. Given such a phylogeny, a popular…

Populations and Evolution · Quantitative Biology 2025-02-12 Martin Frohn , Kerry Manson

Many complex systems are characterized by non-Boltzmann distribution functions of their statistical variables. If one wants to -- justified or not -- hold on to the maximum entropy principle for complex statistical systems (non-Boltzmann)…

Statistical Mechanics · Physics 2009-11-13 Stefan Thurner , Rudolf Hanel

Given a family $\mathcal F\subset 2^{[n]}$, its diversity is the number of sets not containing an element with the highest degree. The concept of diversity has proven to be very useful in the context of $k$-uniform intersecting families. In…

Combinatorics · Mathematics 2018-11-06 Peter Frankl , Andrey Kupavskii

In many problems in data mining and machine learning, data items that need to be clustered or classified are not points in a high-dimensional space, but are distributions (points on a high dimensional simplex). For distributions, natural…

Data Structures and Algorithms · Computer Science 2007-07-13 Sudipto Guha , Andrew McGregor , Suresh Venkatasubramanian

Multivariate extreme value statistical analysis is concerned with observations on several variables which are thought to possess some degree of tail-dependence. In areas such as the modeling of financial and insurance risks, or as the…

Applications · Statistics 2014-12-31 Alexis Bienvenüe , Christian Y. Robert