English
Related papers

Related papers: Maximizing diversity in biology and beyond

200 papers

Maximum entropy distributions with discrete support in $m$ dimensions arise in machine learning, statistics, information theory, and theoretical computer science. While structural and computational properties of max-entropy distributions…

Data Structures and Algorithms · Computer Science 2019-06-04 Damian Straszak , Nisheeth K. Vishnoi

Phylogenetic Diversity (PD) is a prominent quantitative measure of the biodiversity of a collection of present-day species (taxa). This measure is based on the evolutionary distance among the species in the collection. Loosely speaking, if…

Populations and Evolution · Quantitative Biology 2021-07-20 Magnus Bordewich , Charles Semple , Kristina Wicke

Maximum entropy modeling is a flexible and popular framework for formulating statistical models given partial knowledge. In this paper, rather than the traditional method of optimizing over the continuous density directly, we learn a smooth…

Methodology · Statistics 2017-05-01 Gabriel Loaiza-Ganem , Yuanjun Gao , John P. Cunningham

Maximum diversity problems arise in many practical settings from facility location to social networks, and constitute an important class of NP-hard problems in combinatorial optimization. There has been a growing interest in these problems…

Optimization and Control · Mathematics 2024-01-25 Francisco Parreño , Ramón Álvarez-Valdés , Rafael Martí

Design of experiments, random search, initialization of population-based methods, or sampling inside an epoch of an evolutionary algorithm use a sample drawn according to some probability distribution for approximating the location of an…

Neural and Evolutionary Computing · Computer Science 2020-04-27 Laurent Meunier , Carola Doerr , Jeremy Rapin , Olivier Teytaud

In this paper, we study Axelrod's model of social dynamics, introducing the concept of Cultural Diversity ($D$), defined as the variety of sizes of clusters or cultural domains formed, which measures the complexity of the system. We find…

Physics and Society · Physics 2025-07-29 J. Villegas-Febres , E. Castillo-Felisola

The topic of diversity is an interesting subject, both as a purely mathematical concept and also for its applications to important real-life situations. Unfortunately, although the meaning of diversity seems intuitively clear, no precise…

Combinatorics · Mathematics 2014-06-13 Chris Dowden

Entropy serves as a central observable which indicates uncertainty in many chemical, thermodynamical, biological and ecological systems, and the principle of the maximum entropy (MaxEnt) is widely supported in natural science. Recently,…

Physics and Society · Physics 2015-06-03 Bin Xu , Hongen Zhang , Zhijian Wang , Jianbo Zhang

Microbial ecosystems are remarkably diverse, stable, and often consist of a balanced mixture of core and peripheral species. Here we propose a conceptual model exhibiting all these emergent properties in quantitative agreement with real…

Populations and Evolution · Quantitative Biology 2018-04-18 Akshit Goyal , Sergei Maslov

In this note we study the entropy spectrum of rotation classes for collections of finitely many continuous potentials $\varphi_1,\dots,\varphi_m:X\to \mathbb{R}$ with respect to the set of invariant measures of an underlying dynamical…

Dynamical Systems · Mathematics 2020-11-10 Yan Mary He , Christian Wolf

We study the biodiversity problem for resource competition systems with extinctions and self-limitation effects. Our main result establishes estimates of biodiversity in terms of the fundamental parameters of the model. We also prove the…

Dynamical Systems · Mathematics 2018-09-12 Vladimir Kozlov , Sergey Vakulenko , Uno Wennergren , Vladimir G. Tkachev

Evolution has fascinated quantitative and physical scientists for decades: how can the random process of mutation, recombination, and duplication of genetic information generate the diversity of life? What determines the rate of evolution?…

Populations and Evolution · Quantitative Biology 2018-04-23 Richard A. Neher , Aleksandra M. Walczak

Difficulties identifying appropriate biodiversity impact metrics remain a major barrier to inclusion of biodiversity considerations in environmentally responsible investment. We propose and analyse a simple science-based local metric: the…

Populations and Evolution · Quantitative Biology 2023-03-21 Axel G. Rossberg , Jacob D. O'Sullivan , Svetlana Malysheva , Nadav M. Shnerb

The paper presents the investigation and implementation of the relationship between diversity and the performance of multiple classifiers on classification accuracy. The study is critical as to build classifiers that are strong and can…

Artificial Intelligence · Computer Science 2008-10-22 R. Musehane , F. Netshiongolwe , F. V. Nelwamondo , L. Masisi , T. Marwala

The increasing recognition of the association between adverse human health conditions and many environmental substances as well as processes has led to the need to monitor them. An important problem that arises in environmental statistics…

Applications · Statistics 2020-02-05 Yu Wang , Nhu D. Le , James V. Zidek

Studies on distribution, abundance and diversity of species revealed fascinating universalities in macroecology. Many of these patterns, like the species-area and range-abundance relationship or the year-to-year fluctuations in population…

Populations and Evolution · Quantitative Biology 2007-05-23 M. Ravasz , A. Balog , V. Marko , Z. Neda

One of the first successes of neutral ecology was to predict realistically-broad distributions of rare and abundant species. However, it has remained an outstanding theoretical challenge to describe how this distribution of abundances…

Populations and Evolution · Quantitative Biology 2018-07-18 James P. O'Dwyer , Stephen J. Cornell

We introduce a new measure of interdependence among the components of a random vector along the main diagonal of the vector copula, i.e. along the line $u_{1}=\ldots=u_{J}$, for $\left(u_{1},\ldots,u_{J}\right)\in\left[0,1\right]^{J}$. Our…

Methodology · Statistics 2014-08-29 Jhan Rodríguez , András Bárdossy

Entropy rate is a real valued functional on the space of discrete random sources which lacks a closed formula even for subclasses of sources which have intuitive parameterizations. A good way to overcome this problem is to examine its…

Information Theory · Computer Science 2015-01-14 Alexander Schönhuth

The maximum entropy principle (MEP) is a method for obtaining the most likely distribution functions of observables from statistical systems, by maximizing entropy under constraints. The MEP has found hundreds of applications in ergodic and…

Classical Physics · Physics 2016-10-03 Rudolf Hanel , Stefan Thurner , Murray Gell-Mann
‹ Prev 1 3 4 5 6 7 10 Next ›