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Given a graph G=(V, E), a vertex is said to ve-dominate an edge if it is either incident with the edge or adjacent to one of its endpoints. A set of vertices is a ve-dominating set if it ve-dominates every edge of the graph. We introduce…

Combinatorics · Mathematics 2025-12-16 Yasemin Büyükçolak

We propose a categorical framework to reason about scientific explanations: descriptions of a phenomenon meant to translate it into simpler terms, or into a context that has been already understood. Our motivating examples come from systems…

Logic in Computer Science · Computer Science 2023-08-01 Leo Lobski , Fabio Zanasi

Graphs have a superior ability to represent relational data, like chemical compounds, proteins, and social networks. Hence, graph-level learning, which takes a set of graphs as input, has been applied to many tasks including comparison,…

Machine Learning · Computer Science 2023-05-26 Zhenyu Yang , Ge Zhang , Jia Wu , Jian Yang , Quan Z. Sheng , Shan Xue , Chuan Zhou , Charu Aggarwal , Hao Peng , Wenbin Hu , Edwin Hancock , Pietro Liò

Different directed acyclic graphs (DAGs) may be Markov equivalent in the sense that they entail the same conditional independence relations among the observed variables. Meek (1995) characterizes Markov equivalence classes for DAGs (with no…

Methodology · Statistics 2012-06-26 Jiji Zhang

Phylogenetic networks generalise phylogenetic trees and allow for the accurate representation of the evolutionary history of a set of present-day species whose past includes reticulate events such as hybridisation and lateral gene transfer.…

Populations and Evolution · Quantitative Biology 2018-09-05 Joan Carles Pons , Charles Semple , Mike Steel

Matchings and coverings are central topics in graph theory. The close relationship between these two has been key to many fundamental algorithmic and polyhedral results. For mixed graphs, the notion of matching forest was proposed as a…

Combinatorics · Mathematics 2019-10-18 Tamás Király , Yu Yokoi

Tree-width is an invaluable tool for computational problems on graphs. But often one would like to compute on other kinds of objects (e.g. decorated graphs or even algebraic structures) where there is no known tree-width analogue. Here we…

Combinatorics · Mathematics 2022-06-22 Benjamin Merlin Bumpus , Zoltan A. Kocsis

Empirical studies of graphs have contributed enormously to our understanding of complex systems. Known today as network science, what was originally a theoretical study of graphs has grown into a more scientific exploration of communities…

Quantitative Methods · Quantitative Biology 2020-01-01 Ryan E. Langendorf , Debra S. Goldberg

In enumerative combinatorics, it is often a goal to enumerate both labeled and unlabeled structures of a given type. The theory of combinatorial species is a novel toolset which provides a rigorous foundation for dealing with the…

Combinatorics · Mathematics 2013-12-03 Andy Hardt , Pete McNeely , Tung Phan , Justin M. Troyka

A class of associative (super) algebras is presented, which naturally generalize both the symmetric algebra $Sym(V)$ and the wedge algebra $\wedge (V)$, where $V$ is a vector-space. These algebras are in a bijection with those subsets of…

Combinatorics · Mathematics 2007-05-23 A. Regev

Ordered sequences of univariate or multivariate regressions provide statistical models for analysing data from randomized, possibly sequential interventions, from cohort or multi-wave panel studies, but also from cross-sectional or…

Methodology · Statistics 2015-03-19 Nanny Wermuth , Kayvan Sadeghi

We investigate the complexity of isomorphism relations for classes of finitely generated and n-generated computably enumerable (c.e.) algebras, presented via c.e. presentations -- that is, as quotients of term algebras over decidable sets…

Logic · Mathematics 2026-01-21 Meng-Che "Turbo" Ho , Martin Ritter , Luca San Mauro

We study the correspondence between equivalence classes of pairs consisting of real semisimple Lie algebras and their Cartan subalgebras and involutions of the corresponding root system. This can be graphically described by introducing…

Rings and Algebras · Mathematics 2024-06-17 S. Marini , C. Medori , M. Nacinovich

It is shown how a connected graph and a tree with partially prescribed spectrum can be constructed. These constructions are based on a recent result of Salez that every totally real algebraic integer is an eigenvalue of a tree. Our result…

Combinatorics · Mathematics 2017-01-06 Xueliang Li , Wasin So , Ivan Gutman

In this paper, we find a criterium for universal equivalence of partially commutative Lie algebras whose defining graphs are trees. Besides, we obtain bases for partially commutative metabelian Lie algebras.

Rings and Algebras · Mathematics 2012-07-10 Evgeny Poroshenko , Evgeny Timoshenko

In this manuscript, we show that any neural network with any activation function can be represented as a decision tree. The representation is equivalence and not an approximation, thus keeping the accuracy of the neural network exactly as…

Machine Learning · Computer Science 2022-10-26 Caglar Aytekin

Graph-based semantic representations are valuable in natural language processing, where it is often simple and effective to represent linguistic concepts as nodes, and relations as edges between them. Several attempts has been made to find…

Formal Languages and Automata Theory · Computer Science 2021-05-10 Johanna Björklund , Frank Drewes , Anna Jonsson

Causal discovery from observational data is a challenging task that can only be solved up to a set of equivalent solutions, called an equivalence class. Such classes, which are often large in size, encode uncertainties about the orientation…

Machine Learning · Computer Science 2022-03-01 Philippe Brouillard , Perouz Taslakian , Alexandre Lacoste , Sebastien Lachapelle , Alexandre Drouin

Graph neural networks (GNN) have shown great advantages in many graph-based learning tasks but often fail to predict accurately for a task-based on sets of nodes such as link/motif prediction and so on. Many works have recently proposed to…

Machine Learning · Computer Science 2022-06-24 Haorui Wang , Haoteng Yin , Muhan Zhang , Pan Li

We compare classes of finite relational structures via monadic second-order transductions. More precisely, we study the preorder where we set C \subseteq K if, and only if, there exists a transduction {\tau} such that C\subseteq{\tau}(K).…

Logic · Mathematics 2015-07-01 Achim Blumensath , Bruno Courcelle