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The recent experimental discoveries about excitation energy transfer (EET) in light harvesting antenna (LHA) attract a lot of interest. As an open non-equilibrium quantum system, the EET demands more rigorous theoretical framework to…

Statistical Mechanics · Physics 2015-06-15 Xin Chen , Jianshu Cao , Robert Silbey

We study the light absorption and energy transferring in a donor-acceptor system with a bionic structure. In the optimal case with uniform couplings, it is found that the quantum dynamics of this seemingly complicated system is reduced as a…

Biological Physics · Physics 2012-04-13 H. Dong , D. Z. Xu , C. P. Sun

We've studied the B800 part of Rhodoblastus acidophilus light-harvesting complex (LH2) by several quantum chemical techniques based on the density functional theory (DFT) and determined the specific method and a minimal reliable model…

Chemical Physics · Physics 2024-11-01 L. V. Begunovich , E. A. Kovaleva , M. M. Korshunov , V. F. Shabanov

In this paper, we present a theoretical simulation of 87Rb absorption spectrum in a thermal cm-cell which is adaptive to the experimental observation. In experiment, the coupling and probe beams are configured to copropagate but…

Atomic Physics · Physics 2017-03-09 Hong Cheng , Shan-Shan Zhang , Pei-Pei Xin , Yuan Cheng , Hong-Ping Liu

The particle-hole map (PHM) is a tool to visualize electronic excitations, based on representations in a canonical orbital transition space. Introduced as an alternative to the transition density matrix, the PHM has a simple probabilistic…

Chemical Physics · Physics 2016-11-23 Yonghui Li , Carsten A. Ullrich

Non-equilibrium Green's functions (NEGF) formalism combined with extended Huckel (EHT) and charging model are used to study electrical conduction through single-molecule junctions. Analyzed molecular complex is composed of asymmetric…

Mesoscale and Nanoscale Physics · Physics 2009-11-11 Kamil Walczak , Sergey Edward Lyshevski

The Q-cycle mechanism entering the electron and proton transport chain in oxygenic photosynthesis is an example of how biological processes can be efficiently investigated with elementary microscopic models. Here we address the problem of…

Quantum Physics · Physics 2019-11-21 Francesco Tacchino , Antonella Succurro , Oliver Ebenhöh , Dario Gerace

In this paper, we investigate the non-Markovian dynamics of a model to mimic the excitation energy transfer (EET) between chromophores in photosynthesis systems. The numerical path integral method is used. This method includes the…

Chemical Physics · Physics 2015-05-14 Xian-Ting Liang

A theory of electrical transport through molecular wires is used to estimate the electronic factor in the intramolecular electron transfer (ET) in porphyrin-nitrobenzene supermolecules, and to analyze its structure. The chosen molecules…

Soft Condensed Matter · Physics 2007-05-23 Natalya Zimbovskaya , Godfrey Gumbs

Using large-scale, real-time quantum dynamics calculations, we present a detailed analysis of electronic excitation transfer (EET) mechanisms in a multi-particle plasmonic nanoantenna system. Specifically, we utilize real-time,…

Mesoscale and Nanoscale Physics · Physics 2018-03-06 Niranjan V. Ilawe , M. Belén Oviedo , Bryan M. Wong

Proton-coupled electron transfer (PCET) is the underlying mechanism governing important reactions ranging from water splitting in photosynthesis to oxygen reduction in hydrogen fuel cells. The interplay of proton and electronic charge…

Chemical Physics · Physics 2023-09-12 Micheline B. Soley , Pablo E. Videla , Erik T. J. Nibbering , Victor S. Batista

A bacterial photosynthetic light harvesting complex PLHC absorbs a photon and transfers this energy almost perfectly at room temperature RT to a Reaction Center RC, where charge separation occurs. While there are a number of possible light…

Chemical Physics · Physics 2016-08-25 R. H. Squire , N. H. March , A. Rubio , J. R. Ingles , W. A. Cunningham

A scanning tunneling microscope (STM) can do more than atomic imaging and manipulation. Its tunneling current can also be used for the excitation of light, converting electron energy to photon energy. STM based single-molecule…

Optics · Physics 2019-01-01 Yao Zhang , Yang Zhang , Zhenchao Dong

Recently, the coherent modified Redfield theory (CMRT) has been widely used to simulate the excitation-energy-transfer (EET) processes in photosynthetic systems. However, the numerical simulation of the CMRT is computationally expensive…

Chemical Physics · Physics 2025-11-24 Rui Li , Yi Li , Kai-Ya Zhang , Qing Ai

Recent experiments on nanoscale conductors coupled to microwave cavities put in prospect transport investigations of electron-photon interplay in the deep quantum regime. Here we propose a pump-probe scheme to investigate the transient…

Mesoscale and Nanoscale Physics · Physics 2015-06-18 T. L. van den Berg , C. Bergenfeldt , P. Samuelsson

We study the modification of a traditional electromagnetically induced transparency (EIT) stored light technique that includes both EIT and four-wave mixing (FWM) in an ensemble of hot Rb atoms. The standard treatment of light storage…

Quantum Physics · Physics 2015-03-19 Nathaniel B. Phillips , Alexey V. Gorshkov , Irina Novikova

Recently, several works have analysed the efficiency of photosynthetic complexes in a transient scenario and how that efficiency is affected by environmental noise. Here, following a quantum master equation approach, we study the energy and…

Biomolecules · Quantitative Biology 2013-02-28 Daniel Manzano

We combine the coherent modified Redfield theory (CMRT) with the equation of motion-phase matching approach (PMA) to calculate two-dimensional photon echo spectra for photoactive molecular complexes with an intermediate strength of the…

Chemical Physics · Physics 2015-10-28 Hong-Guang Duan , Arend G. Dijkstra , Peter Nalbach , Michael Thorwart

We propose a scheme to transfer molecules from a slow beam into an optical trap using only a single photon absorption and emission cycle. The efficiency of such a scheme is numerically explored for BaF using realistic experimental…

Conversion of solar energy with high quantum efficiencies is a key challenge in energy technologies. Excitation energy transfer (EET) mechanisms, such as F\"orster resonance energy transfer (FRET), play a crucial role in facilitating…

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