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Related papers: Dynamic reconstruction for atom probe tomography

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We analyze the possibility of tomographic reconstruction of a system of three-level atoms in both non-degenerate and degenerate cases. In the non-degenerate case (when both transitions can be accessed independently) a complete…

Quantum Physics · Physics 2009-11-13 Andrei B. Klimov , Hubert de Guise

With recent advances in dynamic scanning probe microscopy techniques, it is now a routine to image the sub-molecular structure of molecules with atomically-engineered tips which are prepared via controlled modification of the tip…

Applied Physics · Physics 2019-03-06 Omur E. Dagdeviren

Single particle cryo-electron microscopy has become a critical tool in structural biology over the last decade, able to achieve atomic scale resolution in three dimensional models from hundreds of thousands of (noisy) two-dimensional…

Numerical Analysis · Mathematics 2023-07-19 Aaditya V. Rangan , Leslie Greengard

In this paper, we demonstrate that atom probe tomography (APT) can be applied to small-molecule organic materials. We show that APT can provide an unprecedented combination of mass resolution of $\lt 1~\mathrm{Da}$, spatial resolution of…

Atomic force microscopy (AFM) enables high-resolution imaging and quantitative force measurement, which is critical for understanding nanoscale mechanical, chemical, and biological interactions. In dynamic AFM modes, however, interaction…

Instrumentation and Detectors · Physics 2025-06-10 Simon Laflamme , Bugrahan Guner , Omur E. Dagdeviren

Electron tomography (ET) has become a standard technique for 3D characterization of materials at the nano-scale. Traditional reconstruction algorithms such as weighted back projection suffer from disruptive artifacts with insufficient…

Computer Vision and Pattern Recognition · Computer Science 2019-04-05 Yi Jiang , Elliot Padgett , Robert Hovden , David A. Muller

Computed tomography (CT) is a non-destructive technique for observing internal images and has proven highly valuable in medical diagnostics. Recent advances in quantum computing have begun to influence tomographic reconstruction techniques.…

Quantum Physics · Physics 2025-05-19 Arim Ryou , Kiwoong Kim , Kyungtaek Jun

In this paper we study the reconstruction of moving object densities from undersampled dynamic X-ray tomography in two dimensions. A particular motivation of this study is to use realistic measurement protocols for practical applications,…

Numerical Analysis · Mathematics 2018-03-28 Martin Burger , Hendrik Dirks , Lena Frerking , Andreas Hauptmann , Tapio Helin , Samuli Siltanen

Partial transfer absorption imaging (PTAI) of ultracold atoms allows for repeated and minimally-destructive measurements of an atomic ensemble. Here, we present a reconstruction technique based on PTAI that can be used to piece together the…

Quantum Gases · Physics 2020-11-12 C. Mordini , D. Trypogeorgos , L. Wolswijk , G. Lamporesi , G. Ferrari

We introduce a Bayesian genetic algorithm for reconstructing atomic models of nanoparticles from a single projection using Z-contrast imaging. The number of atoms in a projected atomic column obtained from annular dark field scanning…

Materials Science · Physics 2022-03-31 Annick De Backer , Sandra Van Aert , Peter D. Nellist , Lewys Jones

Tomographic image reconstruction with deep learning is an emerging field, but a recent landmark study reveals that several deep reconstruction networks are unstable for computed tomography (CT) and magnetic resonance imaging (MRI).…

Image and Video Processing · Electrical Eng. & Systems 2021-09-14 Weiwen Wu , Dianlin Hu , Wenxiang Cong , Hongming Shan , Shaoyu Wang , Chuang Niu , Pingkun Yan , Hengyong Yu , Varut Vardhanabhuti , Ge Wang

Photo-acoustic tomography is a newly developed hybrid imaging modality that combines a high-resolution modality with a high-contrast modality. We analyze the reconstruction of diffusion and absorption parameters in an elliptic equation and…

Analysis of PDEs · Mathematics 2015-06-04 Jie Chen , Yang Yang

Compressed sensing is triggering a major evolution in signal acquisition. It consists in sampling a sparse signal at low rate and later using computational power for its exact reconstruction, so that only the necessary information is…

Statistical Mechanics · Physics 2012-06-07 Florent Krzakala , Marc Mézard , François Sausset , Yifan Sun , Lenka Zdeborová

Plasma diagnostics often employ computerized tomography to estimate emissivity profiles from a finite, and often limited, number of line-integrated measurements. Decades of algorithmic refinement have brought considerable improvements, and…

Plasma Physics · Physics 2026-03-12 D. Hamm , C. Theiler , M. Simeoni , B. P. Duval , T. Debarre , L. Simons , J. R. Queralt

Atom interferometers are sensitive to a wide range of forces by encoding their signals in interference patterns of matter waves. To estimate the magnitude of these forces, the underlying phase shifts they imprint on the atoms must be…

We consider the problem of reconstructing a nanocrystal at atomic resolution from electron microscopy images taken at a few tilt angles. A popular reconstruction approach called discrete tomography confines the atom locations to a coarse…

Numerical Analysis · Mathematics 2020-07-15 Poulami Somanya Ganguly , Felix Lucka , Hermen Jan Hupkes , Kees Joost Batenburg

Atomic force microscopy (AFM) with molecule-functionalized tips has emerged as the primary experimental technique for probing the atomic structure of organic molecules on surfaces. Most experiments have been limited to nearly planar…

Electrical impedance tomography is an imaging modality for extracting information on the conductivity distribution inside a physical body from boundary measurements of current and voltage. In many practical applications, it is a priori…

Numerical Analysis · Mathematics 2014-06-06 Lauri Harhanen , Nuutti Hyvönen , Helle Majander , Stratos Staboulis

Image reconstruction in X ray tomography consists in determining an object from its projections. In many applications such as non destructive testing, we look for an image who has a constant value inside a region (default) and another…

Data Analysis, Statistics and Probability · Physics 2007-05-23 A. Mohammad-Djafari

Tomography deals with the reconstruction of objects from their projections, acquired along a range of angles. Discrete tomography is concerned with objects that consist of a small number of materials, which makes it possible to compute…

Computer Vision and Pattern Recognition · Computer Science 2020-09-07 Mathé Zeegers , Felix Lucka , Kees Joost Batenburg