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In conventional tomographic reconstruction, the pre-processing step includes flat-field correction, where each sample projection on the detector is divided by a reference image taken without the sample. When using coherent X-rays as probe,…

Image and Video Processing · Electrical Eng. & Systems 2024-10-24 Viktor Nikitin , Marcus Carlsson , Doga Gursoy , Rajmund Mokso , Peter Cloetens

Single particle cryo-electron microscopy has become a critical tool in structural biology over the last decade, able to achieve atomic scale resolution in three dimensional models from hundreds of thousands of (noisy) two-dimensional…

Numerical Analysis · Mathematics 2023-07-19 Aaditya V. Rangan , Leslie Greengard

Recent research in tomographic reconstruction is motivated by the need to efficiently recover detailed anatomy from limited measurements. One of the ways to compensate for the increasingly sparse sets of measurements is to exploit the…

Computer Vision and Pattern Recognition · Computer Science 2017-12-08 Preeti Gopal , Ritwick Chaudhry , Sharat Chandran , Imants Svalbe , Ajit Rajwade

Scattering scanning near-field optical microscopy (s-SNOM) is a technique to enhance the spatial resolution, and when combined by Fourier transform spectroscopy it can provide spectroscopic information with high spatial resolution. This…

In the past years modern mathematical methods for image analysis have led to a revolution in many fields, from computer vision to scientific imaging. However, some recently developed image processing techniques successfully exploited by…

Instrumentation and Methods for Astrophysics · Physics 2015-01-19 Marco Castellano , Daniele Ottaviani , Adriano Fontana , Emiliano Merlin , Stefano Pilo , Maurizio Falcone

There exist two groups of electron microscopy methods that are capable of providing three-dimensional (3D) structural information of an object, i.e., electron tomography and depth sectioning. Electron tomography is capable of resolving…

Materials Science · Physics 2024-05-28 Liangze Mao , Jizhe Cui , Rong Yu

The need for tomographic reconstruction from sparse measurements arises when the measurement process is potentially harmful, needs to be rapid, or is uneconomical. In such cases, information from previous longitudinal scans of the same…

Image and Video Processing · Electrical Eng. & Systems 2019-09-13 Preeti Gopal , Sharat Chandran , Imants Svalbe , Ajit Rajwade

Nanoparticle surface structural dynamics is believed to play a significant role in regulating functionalities such as diffusion, reactivity, and catalysis but the atomic-level processes are not well understood. Atomic resolution…

Scanning probe microscopy (SPM) is ubiquitous in nanoscale science allowing the observation of features in real space down to the angstrom resolution. The scanning nature of SPM, wherein a sharp tip rasters the surface during which a…

Instrumentation and Detectors · Physics 2024-11-20 Maxime Le Ster , Sławomir Pawłowski , Iaroslav Lutsyk , Paweł Janusz Kowalczyk

We study inverse problems of reconstructing static and dynamic discrete structures from tomographic data (with a special focus on the `classical' task of reconstructing finite point sets in $\mathbb{R}^d$). The main emphasis is on recent…

Data Structures and Algorithms · Computer Science 2018-11-08 Andreas Alpers , Peter Gritzmann

Conventional Magnetic Resonance Imaging (MRI) is hampered by long scan times and only qualitative image contrasts that prohibit a direct comparison between different systems. To address these limitations, model-based reconstructions…

Image and Video Processing · Electrical Eng. & Systems 2022-10-24 Xiaoqing Wang , Zhengguo Tan , Nick Scholand , Volkert Roeloffs , Martin Uecker

Atomistic simulations have become a powerful tool in materials research due to the extremely fine spatial and temporal resolution provided by such techniques. In order to understand the fundamental principles which govern material behavior…

Materials Science · Physics 2014-08-26 Jason F. Panzarino , Timothy J. Rupert

In this paper, we introduce silhouette tomography, a novel formulation of X-ray computed tomography that relies only on the geometry of the imaging system. We formulate silhouette tomography mathematically and provide a simple method for…

Image and Video Processing · Electrical Eng. & Systems 2024-02-13 Evan Bell , Michael T. McCann , Marc Klasky

Image based diagnostics are interpreted in the context of spatial resolution. The same is true for tomographic image reconstruction. Current empirically driven approaches to quantify spatial resolution rely on a deterministic formulation…

Image and Video Processing · Electrical Eng. & Systems 2021-02-03 Johannes Emmert , Steven Wagner , Kyle J. Daun

A method for reconstructing joint photon-number distributions of twin beams from the experimental photocount histograms is suggested and experimentally implemented. Contrary to the standard reconstruction methods, it incorporates spatial…

Quantum Physics · Physics 2018-12-11 Jan Perina , Vaclav Michalek , Ondrej Haderka

Real-space refinement of atomic models in macromolecular crystallography or in cryo electron microscopy fits a model to a map obtained experimentally. This requires generating model maps of a limited resolution which moreover may vary from…

Computational Engineering, Finance, and Science · Computer Science 2022-06-22 Ludmila Urzhumtseva , Vladimir Y. Lunin , Alexandre Urzhumtsev

Scanning tunnelling microscopy (STM) enables atomic-resolution imaging and atom manipulation, but its utility is often limited by tip degradation and slow serial data acquisition. Fabrication adds another layer of complexity since the tip…

Computer Vision and Pattern Recognition · Computer Science 2025-10-31 Nikola L. Kolev , Tommaso Rodani , Neil J. Curson , Taylor J. Z. Stock , Alberto Cazzaniga

We demonstrate that the spatial resolution of images in optical tomography is not limited to the fundamental length scale of one transport mean free path. This result is facilitated by the introduction of novel corrections to the standard…

Optics · Physics 2007-05-23 George Y. Panasyuk , Vadim A. Markel , John C. Schotland

Atom probe tomography (APT) is routinely used for analyzing property-enhancing particles in the nanometer-size range and below, and plays a prominent role in the analysis of solute clusters. However, the question of how well these small…

Materials Science · Physics 2020-02-25 Frédéric De Geuser , Baptiste Gault

Atomic-resolution scanning transmission electron microscopy (STEM) characterization requires precise tilting of the specimen to high symmetric zone axis, which is usually processed in reciprocal space by following the diffraction patterns.…

Materials Science · Physics 2024-06-04 Jiake Wei , Zhangze Xu , Wenjie Shen , Bin Feng , Ryo Ishikawa , Naoya Shibata , Yuichi Ikuhara , Xuedong Bai
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