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As the field of Topological Data Analysis continues to show success in theory and in applications, there has been increasing interest in using tools from this field with methods for machine learning. Using persistent homology, specifically…

Computational Geometry · Computer Science 2020-02-26 Sarah Tymochko , Elizabeth Munch , Firas A. Khasawneh

We introduce the persistence heatmap, a parametrized summary based on representative cycles in persistence diagrams, designed to enhance stability and explainability in topological data analysis. Algorithms to compute persistence diagrams…

Algebraic Topology · Mathematics 2025-10-15 Himanshu Yadav , Alexander Wagner , Peter Bubenik

Natural data offer a hard challenge to data analysis. One set of tools is being developed by several teams to face this difficult task: Persistent topology. After a brief introduction to this theory, some applications to the analysis and…

Algebraic Topology · Mathematics 2017-08-21 Massimo Ferri

Persistence homology is a tool used to measure topological features that are present in data sets and functions. Persistence pairs births and deaths of these features as we iterate through the sublevel sets of the data or function of…

Computational Geometry · Computer Science 2010-02-10 Brittany Terese Fasy

We introduce a consistent estimator for the homology (an algebraic structure representing connected components and cycles) of level sets of both density and regression functions. Our method is based on kernel estimation. We apply this…

Statistics Theory · Mathematics 2016-09-30 Omer Bobrowski , Sayan Mukherjee , Jonathan E. Taylor

In this paper we study the persistent homology associated with topological crackle generated by distributions with an unbounded support. Persistent homology is a topological and algebraic structure that tracks the creation and destruction…

Probability · Mathematics 2018-10-04 Takashi Owada , Omer Bobrowski

Topological Data Analysis (TDA) studies the shape of data. A common topological descriptor is the persistence diagram, which encodes topological features in a topological space at different scales. Turner, Mukeherjee, and Boyer showed that…

Graphs may be used to represent many different problem domains -- a concrete example is that of detecting communities in social networks, which are represented as graphs. With big data and more sophisticated applications becoming widespread…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-03 Miguel E. Coimbra , Alexandre P. Francisco , Luis Veiga

The entropy of a graph was first introduced by Rashevsky \cite{Rashevsky} and Trucco \cite{Trucco} to interpret as the structural information content of the graph and serve as a complexity measure. In this paper, we first state a number of…

Information Theory · Computer Science 2015-05-20 Xueliang Li , Meiqin Wei

Persistent homology barcodes and diagrams are a cornerstone of topological data analysis that capture the "shape" of a wide range of complex data structures, such as point clouds, networks, and functions. However, their use in statistical…

Algebraic Topology · Mathematics 2024-09-24 Qiquan Wang , Inés García-Redondo , Pierre Faugère , Gregory Henselman-Petrusek , Anthea Monod

The persistence theory has been employed by several authors in order to study persistence properties of dynamical systems generated by ordinary differential equations or maps across diverse disciplines. In this note, the author discusses a…

Dynamical Systems · Mathematics 2025-09-09 N. Pant

The last decade has witnessed an increase of interest in the spatial analysis of structured point patterns over networks whose analysis is challenging because of geometrical complexities and unique methodological problems. In this context,…

Methodology · Statistics 2017-12-06 Matthias Eckardt , Jorge Mateu

Topological data analysis (TDA) is an emerging mathematical concept for characterizing shapes in complex data. In TDA, persistence diagrams are widely recognized as a useful descriptor of data, and can distinguish robust and noisy…

Algebraic Topology · Mathematics 2016-04-27 Genki Kusano , Kenji Fukumizu , Yasuaki Hiraoka

The analysis of financial markets using models inspired by statistical physics offers a fruitful approach to understand collective and extreme phenomena [3, 14, 15] In this paper, we present a study based on a 2D Ising network model where…

Statistical Finance · Quantitative Finance 2025-12-23 Hernán Ezequiel Benítez , Claudio Oscar Dorso

One of the most common approaches to the analysis of dynamic networks is through time-window aggregation. The resulting representation is a sequence of static networks, i.e. the snapshot graph. Despite this representation being widely used…

Social and Information Networks · Computer Science 2021-12-07 Alessandro Chiappori , Rémy Cazabet

Statistical analysis on object data presents many challenges. Basic summaries such as means and variances are difficult to compute. We apply ideas from topology to study object data. We present a framework for using persistence landscapes…

Methodology · Statistics 2019-12-12 Vic Patrangenaru , Peter Bubenik , Robert L. Paige , Daniel Osborne

There have been rapid developments in model-based clustering of graphs, also known as block modelling, over the last ten years or so. We review different approaches and extensions proposed for different aspects in this area, such as the…

Machine Learning · Statistics 2020-01-01 Clement Lee , Darren J Wilkinson

We apply persistent homology, the dominant tool from the field of topological data analysis, to study electoral redistricting. Our method combines the geographic information from a political districting plan with election data to produce a…

Algebraic Topology · Mathematics 2020-07-07 Moon Duchin , Tom Needham , Thomas Weighill

Persistent homology computes topological invariants from point cloud data. Recent work has focused on developing statistical methods for data analysis in this framework. We show that, in certain models, parametric inference can be performed…

Quantitative Methods · Quantitative Biology 2014-06-19 Kevin Emmett , Daniel Rosenbloom , Pablo Camara , Raul Rabadan

Graph clustering (or community detection) has long drawn enormous attention from the research on web mining and information networks. Recent literature on this topic has reached a consensus that node contents and link structures should be…

Social and Information Networks · Computer Science 2017-12-25 Carl Yang , Mengxiong Liu , Zongyi Wang , Liyuan Liu , Jiawei Han
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