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Growth pattern dynamics lie at the heart of morphogenesis. Here, we investigate the growth of plant leaves. We compute the conformal transformation that maps the contour of a leaf at a given stage onto the contour of the same leaf at a…

Tissues and Organs · Quantitative Biology 2016-11-23 Karen Alim , Shahaf Armon , Boris I. Shraiman , Arezki Boudaoud

A paradigmatic nonhyperbolic dynamical system exhibiting deterministic diffusion is the smooth nonlinear climbing sine map. We find that this map generates fractal hierarchies of normal and anomalous diffusive regions as functions of the…

Chaotic Dynamics · Physics 2009-11-07 N. Korabel , R. Klages

The distribution of the deformations of elementary cells is studied in an abstract lattice constructed from the existence of the empty set. One combination rule determining oriented sequences with continuity of set-distance function in such…

General Physics · Physics 2007-05-23 Michel Bounias , Volodymyr Krasnoholovets

Consider two urns, $A$ and $B$, where initially $A$ contains a large number $n$ of balls and $B$ is empty. At each step, with equal probability, either we pick a ball at random in $A$ and place it in $B$, or vice-versa (provided of course…

Probability · Mathematics 2010-07-26 Jean Bertoin

Many methods have been developed for finding the commonalities between different organisms to study their phylogeny. The structure of metabolic networks also reveal valuable insights into metabolic capacity of species as well as into the…

Molecular Networks · Quantitative Biology 2016-04-08 Krishanu Deyasi , Anirban Banerjee , Bony Deb

In this paper we present a method for finding the absorbing radical of a finite-dimensional evolution algebra. Such a method consists of finding the acyclic vertices of an oriented graph associated with the algebra. The set of generators…

Rings and Algebras · Mathematics 2023-06-28 Paula Cadavid , Tiago Reis , Mary Luz Rodiño

A toric degeneration in algebraic geometry is a process where a given projective variety is being degenerated into a toric one. Then one can obtain information about the original variety via analyzing the toric one, which is a much easier…

Symplectic Geometry · Mathematics 2018-12-31 Milena Pabiniak

Generalized Pythagoras trees were developed for visualizing hierarchical data, producing organic, fractal-like representations. However, the drawback of the original layout algorithm is visual overlap of tree branches. To avoid such…

Graphics · Computer Science 2019-07-31 Tanja Munz , Michael Burch , Toon van Benthem , Yoeri Poels , Fabian Beck , Daniel Weiskopf

Controlled manipulation of multiple objects whose dynamics are closely linked is a challenging problem within contact-rich manipulation, requiring an understanding of how the movement of one will impact the others. Using the Jenga game as a…

Robotics · Computer Science 2025-05-15 Kavya Puthuveetil , Xinyi Zhang , Kazuto Yokoyama , Tetsuya Narita

A monotone drawing of a graph G is a straight-line drawing of G such that every pair of vertices is connected by a path that is monotone with respect to some direction. Trees, as a special class of graphs, have been the focus of several…

Data Structures and Algorithms · Computer Science 2025-05-19 Anargyros Oikonomou , Antonios Symvonis

Cracks on a painting is not a defect but an inimitable signature of an artwork which can be used for origin examination, aging monitoring, damage identification, and even forgery detection. This work presents the development of a new…

Computer Vision and Pattern Recognition · Computer Science 2019-12-05 Oleksii Sidorov , Jon Yngve Hardeberg

The transmission of a vertex $v$ of a graph $G$ is the sum of distances from $v$ to all the other vertices in $G$. A graph is transmission irregular if all of its vertices have pairwise different transmissions. A starlike tree…

Combinatorics · Mathematics 2020-04-20 Kexiang Xu , Sandi Klavžar

In this note we describe how some objects from generalized geometry appear in the qualitative analysis and numerical simulation of mechanical systems. In particular we discuss double vector bundles and Dirac structures. It turns out that…

Numerical Analysis · Mathematics 2018-07-19 Vladimir Salnikov , Aziz Hamdouni

We study the statistics of edges and vertices in the vicinity of a reference vertex (origin) within random planar quadrangulations and Eulerian triangulations. Exact generating functions are obtained for theses graphs with fixed numbers of…

Statistical Mechanics · Physics 2010-04-05 J. Bouttier , P. Di Francesco , E. Guitter

We extend a formal framework that previously derived time from the multifractal structure of biological lineages (Hudnall \& D'Souza, 2025). That work showed that time itself is multifractal -- not a universal background dimension, but an…

Populations and Evolution · Quantitative Biology 2025-11-10 Kevin Hudnall

We study a size-structured model proposed in [1] C. Barril, \`A. Calsina, O. Diekmann, J. Z. Farkas, On competition through growth reduction, e-print arXiv:2303.02981, to describe the dynamics of trees growth in the forest. Our approach to…

Dynamical Systems · Mathematics 2024-01-19 Franco Herrera , Sergei Trofimchuk

We provide a generalization of the notion of Dirac system by using Morse families to intrinsically embrace the dynamics associated with different physical systems such as constrained variational calculus, optimal control, Lagrangian…

Mathematical Physics · Physics 2018-04-17 M. Barbero-Liñán , H. Cendra , E. García-Toraño Andrés , D. Martín de Diego

Rapid advance of experimental techniques provides an unprecedented in-depth view into complex developmental processes. Still, little is known on how the complexity of multicellular organisms evolved by elaborating developmental programs and…

Molecular Networks · Quantitative Biology 2021-07-16 Somya Mani , Tsvi Tlusty

Plants solve complex problems without centralized control, relying instead on growth-driven dynamics to sense, navigate, and optimize resource acquisition. This review presents a unified physical framework for understanding plant behavior…

Other Condensed Matter · Physics 2026-04-24 Yasmine Meroz

Morphogenesis is the biological process that causes the emergence and changes of patterns (tissues and organs) in living organisms. It is a robust, self-organising mechanism, governed by Genetic Regulatory Networks (GRN), that hasn't been…

Molecular Networks · Quantitative Biology 2026-03-17 Yuriria Cortes-Poza , J. Rogelio Perez-Buendia