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Four-dimensional (4D) wide coverage computed tomography (CT) is an effective imaging modality for measuring the mechanical function of the myocardium. However, repeated CT measurement across several heartbeats is still a concern. A…

Medical Physics · Physics 2024-03-14 Zhye Yin , Pengwei Wu , Ashish Manohar , Elliot R. McVeigh , Jed D. Pack

We demonstrate in vivo dynamic optical coherence tomography (DOCT) imaging of zebrafish development from 2 weeks to 12 months post-fertilization, integrated with polarization-sensitive OCT (PS-OCT), OCT angiography (OCTA), and histological…

Echocardiography plays an important part in diagnostic aid in cardiac diseases. A critical step in echocardiography-aided diagnosis is to extract the standard planes since they tend to provide promising views to present different structures…

Computer Vision and Pattern Recognition · Computer Science 2016-07-21 Yun Gu , Guang-Zhong Yang , Jie Yang , Kun Sun

In this paper a microscopic model for a signalling process in the cardiac muscle tissue of the left ventricular wall, comprising non-periodic fibrous microstructure is considered. To derive the macroscopic equations we approximate the…

Analysis of PDEs · Mathematics 2016-01-01 Mariya Ptashnyk

Fetal echocardiography is essential for detecting congenital heart disease (CHD), facilitating pregnancy management, optimized delivery planning, and timely postnatal interventions. Among standard imaging planes, the four-chamber (4CH) view…

Image and Video Processing · Electrical Eng. & Systems 2026-02-09 Yingyu Yang , Qianye Yang , Can Peng , Elena D'Alberti , Olga Patey , Aris T. Papageorghiou , J. Alison Noble

Quantifying cardiovascular parameters like ejection fraction in zebrafish as a host of biological investigations has been extensively studied. Since current manual monitoring techniques are time-consuming and fallible, several image…

Image and Video Processing · Electrical Eng. & Systems 2026-03-03 Amir Mohammad Naderi , Jennifer G. Casey , Mao-Hsiang Huang , Rachelle Victorio , David Y. Chiang , Calum MacRae , Hung Cao , Vandana A. Gupta

The limitations of conventional imaging techniques have hitherto precluded a thorough and formal investigation of the complex morphology of the left ventricular (LV) endocardial surface and its relation to the severity of Coronary Artery…

Computer Vision and Pattern Recognition · Computer Science 2013-02-14 Anirban Mukhopadhyay , Zhen Qian , Suchendra M. Bhandarkar , Tianming Liu , Sarah Rinehart , Szilard Voros

We propose a deep learning method to model and generate synthetic aortic shapes based on representing shapes as the zero-level set of a neural signed distance field, conditioned by a family of trainable embedding vectors with encode the…

Computer Vision and Pattern Recognition · Computer Science 2024-09-25 Andrei Gasparovici , Alex Serban

Optical projection tomography (OPT) is a powerful tool for biomedical studies. It achieves 3D visualization of mesoscopic biological samples with high spatial resolution using conventional tomographic-reconstruction algorithms. However,…

Computer Vision and Pattern Recognition · Computer Science 2023-10-02 Yan Liu , Jonathan Dong , Thanh-An Pham , Francois Marelli , Michael Unser

A phase mapping is an approach to processing signals of electrograms recorded from the surface of cardiac tissue. The main concept of phase mapping is the application of the phase transformation with the aim to obtain signals with useful…

Signal Processing · Electrical Eng. & Systems 2021-04-14 Konstantin Ushenin , Tatyana Nesterova , Dmitry Shmarko , Vladimir Sholokhov

Cardiovascular diseases (CVDs) are the leading causes of mortality worldwide. The contraction and relaxation of left ventricle (LV) is the main driving force of blood circulation. Altered LV hemodynamics is believed to be associated with…

Medical Physics · Physics 2019-11-04 Fanwei Kong , Christoph Augustin , Kevin Sack , Shawn Shadden

In this paper, we present an abstract model of visualization and inference processes and describe an information-theoretic measure for optimizing such processes. In order to obtain such an abstraction, we first examined six classes of…

Human-Computer Interaction · Computer Science 2016-11-23 Min Chen , Amos Golan

Ventricular Fibrillation (VF) is a malignant cardiac arrhythmia and the leading cause of sudden cardiac death, characterized by disorganized, high-frequency ventricular activity that results in the rapid loss of coordinated pump function…

Biological Physics · Physics 2025-11-04 Artemii Remizov , Sergey Lapin

We analyze left atrium haemodynamics, highlighting differences among healthy individuals and patients affected by atrial fibrillation. The computational study is based on patient-specific geometries of the left atria to simulate blood flow…

Fluid Dynamics · Physics 2022-10-06 Mattia Corti , Alberto Zingaro , Luca Dede' , Alfio Maria Quarteroni

The oscillations of the human heart rate are inherently complex and non-linear -- they are best described by mathematical chaos, and they present a challenge when applied to the practical domain of cardiovascular health monitoring in…

Machine Learning · Computer Science 2025-11-03 Berken Utku Demirel , Christian Holz

Objective: The Mapper algorithm is a qualitative method in topological data analysis that constructs graphs from point clouds by combining dimensionality reduction and clustering techniques. The aim of this study is to apply Mapper,…

Quantitative Methods · Quantitative Biology 2026-04-22 Aina Ferrà Marcús , Carles Casacuberta , Josep Vives , Joan Guich , Gerard Amorós-Figueras , Jose M. Guerra

The clinical application of patient-specific modelling of the heart can provide valuable insights in supplementing and advancing methods of diagnosis as well as helping to devise the best possible therapeutic approach for each individual…

Medical Physics · Physics 2023-08-03 Sebastian Skatulla , Carlo Sansour , Mary Familusi , Jagir Hussan , Ntobeko Ntusi

The glymphatic system (GS) is a transit passage that facilitates brain metabolic waste removal and its dysfunction has been associated with neurodegenerative diseases such as Alzheimer's disease. The GS has been studied by acquiring…

Computer Vision and Pattern Recognition · Computer Science 2018-09-05 Rena Elkin , Saad Nadeem , Eldad Haber , Klara Steklova , Hedok Lee , Helene Benveniste , Allen Tannenbaum

4D Flow is an MRI sequence which allows acquisition of 3D images of the heart. The data is typically acquired volumetrically, so it must be reformatted to generate cardiac long axis and short axis views for diagnostic interpretation. These…

Computer Vision and Pattern Recognition · Computer Science 2017-11-07 Matthieu Le , Jesse Lieman-Sifry , Felix Lau , Sean Sall , Albert Hsiao , Daniel Golden

Visualisation methods help in the discovery of characteristics that might not have been apparent using mathematical models and summary statistics. However, visualisation methods have not received much attention in demography, with the…

Applications · Statistics 2018-01-26 Han Lin Shang