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Given a pattern of length $m$ and a text of length $n$, the goal in $k$-mismatch pattern matching is to compute, for every $m$-substring of the text, the exact Hamming distance to the pattern or report that it exceeds $k$. This can be…

Data Structures and Algorithms · Computer Science 2017-04-06 Paweł Gawrychowski , Przemysław Uznański

The equidistant subsequence pattern matching problem is considered. Given a pattern string $P$ and a text string $T$, we say that $P$ is an \emph{equidistant subsequence} of $T$ if $P$ is a subsequence of the text such that consecutive…

Data Structures and Algorithms · Computer Science 2020-02-18 Mitsuru Funakoshi , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda , Ayumi Shinohara

Encoding data structures store enough information to answer the queries they are meant to support but not enough to recover their underlying datasets. In this paper we give the first encoding data structure for the challenging problem of…

Data Structures and Algorithms · Computer Science 2017-02-21 Travis Gagie , Giovanni Manzini , Rossano Venturini

In this work of thesis we introduce and study a new family of sorting devices, which we call pattern-avoiding machines. They consist of two stacks in series, equipped with a greedy procedure. On both stacks we impose a static constraint in…

Combinatorics · Mathematics 2022-10-10 Giulio Cerbai

We give an improved algorithm for counting the number of $1324$-avoiding permutations, resulting in $14$ further terms of the generating function, which is now known for all patterns of length $\le 50$. We re-analyse the generating function…

Combinatorics · Mathematics 2017-11-21 Andrew R. Conway , Anthony J. Guttmann , Paul Zinn-Justin

Many applications, including rank aggregation and crowd-labeling, can be modeled in terms of a bivariate isotonic matrix with unknown permutations acting on its rows and columns. We consider the problem of estimating such a matrix based on…

Machine Learning · Statistics 2018-06-06 Cheng Mao , Ashwin Pananjady , Martin J. Wainwright

We consider two related problems arising from a question of R. Graham on quasirandom phenomena in permutation patterns. A ``pattern'' in a permutation $\sigma$ is the order type of the restriction of $\sigma : [n] \to [n]$ to a subset $S…

Combinatorics · Mathematics 2008-01-29 Joshua Cooper , Andrew Petrarca

A universal cycle for permutations of length $n$ is a cyclic word or permutation, any factor of which is order-isomorphic to exactly one permutation of length $n$, and containing all permutations of length $n$ as factors. It is well known…

Combinatorics · Mathematics 2018-07-24 Alice L. L. Gao , Sergey Kitaev , Wolfgang Steiner , Philip B. Zhang

Let $\mathcal{D}$ be a collection of $D$ documents, which are strings over an alphabet of size $\sigma$, of total length $n$. We describe a data structure that uses linear space and and reports $k$ most relevant documents that contain a…

Data Structures and Algorithms · Computer Science 2013-08-02 Gonzalo Navarro , Yakov Nekrich

Following a question of J. Cooper, we study the expected number of occurrences of a given permutation pattern $q$ in permutations that avoid another given pattern $r$. In some cases, we find the pattern that occurs least often, (resp. most…

Combinatorics · Mathematics 2009-10-08 Miklos Bona

We present an algorithm for generating Poisson-disc patterns taking O(N) time to generate $N$ points. The method is based on a grid of regions which can contain no more than one point in the final pattern, and uses an explicit model of…

Graphics · Computer Science 2013-03-29 Thouis R. Jones , David R. Karger

We make progress on two important problems regarding attribute efficient learnability. First, we give an algorithm for learning decision lists of length $k$ over $n$ variables using $2^{\tilde{O}(k^{1/3})} \log n$ examples and time…

Machine Learning · Computer Science 2007-05-23 Adam R. Klivans , Rocco A. Servedio

In this paper, we develop a simple and fast online algorithm for solving a class of binary integer linear programs (LPs) arisen in general resource allocation problem. The algorithm requires only one single pass through the input data and…

Data Structures and Algorithms · Computer Science 2020-07-07 Xiaocheng Li , Chunlin Sun , Yinyu Ye

We extend the notion of an enumeration scheme developed by Zeilberger and Vatter to the case of vincular patterns (also called "generalized patterns" or "dashed patterns"). In particular we provide an algorithm which takes in as input a set…

Combinatorics · Mathematics 2012-01-17 Andrew M. Baxter , Lara K. Pudwell

The observed frequency of the longest proper prefix, the longest proper suffix, and the longest infix of a word $w$ in a given sequence $x$ can be used for classifying $w$ as avoided or overabundant. The definitions used for the expectation…

The study of pattern containment and avoidance for linear permutations is a well-established area of enumerative combinatorics. A cyclic permutation is the set of all rotations of a linear permutation. Callan initiated the study of…

This paper presents fast first-order methods for solving linear programs (LPs) approximately. We adapt online linear programming algorithms to offline LPs and obtain algorithms that avoid any matrix multiplication. We also introduce a…

Optimization and Control · Mathematics 2024-11-07 Wenzhi Gao , Dongdong Ge , Chunlin Sun , Yinyu Ye

This paper studies the \emph{subset sampling} problem. The input is a set $\mathcal{S}$ of $n$ records together with a function $\textbf{p}$ that assigns each record $v\in\mathcal{S}$ a probability $\textbf{p}(v)$. A query returns a random…

Data Structures and Algorithms · Computer Science 2023-07-24 Jinchao Huang , Sibo Wang

The pivot algorithm for self-avoiding walks has been implemented in a manner which is dramatically faster than previous implementations, enabling extremely long walks to be efficiently simulated. We explicitly describe the data structures…

Statistical Mechanics · Physics 2016-10-06 Nathan Clisby

In this paper, we find an explicit formula for the generating function that counts the circular permutations of length n avoiding the pattern 23 4 1 whose enumeration was raised as an open problem by Rupert Li. This then completes in all…

Combinatorics · Mathematics 2021-11-09 Toufik Mansour , Mark Shattuck
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