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Innocent musing on geodesics on the surface of helical pasta shapes leads to a single continuous 4-parameter family of surfaces invariant under at least a 1-parameter symmetry group and which contains as various limits spheres, tori,…
A large number of powerful, high-quality, and open-source simulation packages exist to efficiently perform molecular dynamics simulations, and their prevalence has greatly accelerated discoveries across a wide range of scientific domains.…
Nuclear pasta, that is an inhomogeneous distribution of nuclear matter characterised by non-spherical clustered structures, is expected to occur in a narrow spatial region at the bottom of the inner crust of neutron stars, but the width of…
Spatial distributions are presented that quantitatively capture how polymer properties (e.g., segment alignment, density, and potential energy) vary with distance from nascent polymer crystals (nuclei) in prototypical polyethylene melts. It…
Based on the relativistic mean field (RMF) model with Thomas-Fermi approximation, we investigate the elastic properties of neutron star matter. The elastic constants are estimated by introducing deformations on the nuclear pasta structures…
Recently, we presented a framework for understanding protein structure based on the idea that simple constructs of holding hands or touching of objects can be used to rationalize the common characteristics of globular proteins. We developed…
We study conditions under which carbon clusters of different sizes form and stabilize. {We describe an approach to equilibrium by simulating tenuous carbon gas dynamics to long times.} First, we use reactive molecular dynamics simulations…
Confined thin structures are ubiquitous in nature. Spatial and length constraints have led to a number of novel packing strategies at both the micro-scale, as when DNA packages inside a capsid, and the macro-scale, seen in plant root…
We conduct three-dimensional hydrodynamical simulations of two opposite jets launched from a binary stellar system into a previously ejected shell and show that the interaction can form barrel-like and H-like shapes in the descendant…
We study the dynamics of galaxy mergers, with emphasis on the gas feeding of nuclear regions, using a suite of hydrodynamical simulations of galaxy encounters. The high spatial and temporal resolution of the simulations allows us to not…
Quantum entanglement offers a unique perspective into the underlying structure of strongly-correlated systems such as atomic nuclei. In this paper, we use quantum information tools to analyze the structure of light and medium-mass…
Recent spectroscopic observations of planetary nebulae (PNe) in several elliptical galaxies have revealed structural and kinematical properties of the outer stellar halo regions. In order to elucidate the origin of the properties of these…
We present a comprehensive series of $N$-body as well as $N$-body + SPH simulations to study the secular evolution of the structure of disk galaxies. Our simulations are organized in a hierarchy of increasing complexity, ranging from…
We investigate how galactic disk structures connect to the detailed properties of their host dark-matter halos using the TNG50 simulation. From the hydrodynamic and matched dark-matter-only runs, we measure a comprehensive list of halo…
Charged (nano)particles confined in electrodynamic traps can evolve into strongly correlated Coulomb systems which are the subject of current investigation. Exciting physical phenomena associated to Coulomb systems are reported such as…
Astrophysical observations suggest that magnetic reconnection in relativistic plasmas plays an important role in the acceleration of energetic particles. Modeling this accurately requires numerical schemes capable of addressing large scales…
Packing problems have been a source of fascination for millenia and their study has produced a rich literature that spans numerous disciplines. Investigations of hard-particle packing models have provided basic insights into the structure…
Using the density functional theory (DFT) with the relativistic mean field (RMF) model, we study the non-uniform state of nuclear matter, ``nuclear pasta''. We self-consistently include the Coulomb interaction together with other…
Nematic liquid crystals confined to geometrically as well as chemically patterned substrate on one end and a flat substrate with strong anchoring on the other is studied using non-Boltzmann Monte Carlo methods. We observe significant…
Nuclear matter is considered to be inhomogeneous at subnuclear densities that are realized in supernova cores and neutron star crusts, and the structures of nuclear matter change from spheres to cylinders, slabs, cylindrical holes and…