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Although the preservation of shape continuity and physiological anatomy is a natural assumption in the segmentation of medical images, it is often neglected by deep learning methods that mostly aim for the statistical modeling of input data…

Computer Vision and Pattern Recognition · Computer Science 2023-05-01 Yousef Yeganeh , Azade Farshad , Goktug Guevercin , Amr Abu-zer , Rui Xiao , Yongjian Tang , Ehsan Adeli , Nassir Navab

While branching network structures abound in nature, their objective analysis is more difficult than expected because existing quantitative methods often rely on the subjective judgment of branch structures. This problem is particularly…

Algebraic Topology · Mathematics 2024-02-13 Haruhisa Oda , Mayuko Kida , Yoichi Nakata , Hiroki Kurihara

The Crack Topology Score (CTS) is a recently proposed metric that focuses on evaluating the topological correctness of crack segmentation outputs. While pixel-wise metrics such as IoU or F1-score fail to capture structural validity, CTS…

Image and Video Processing · Electrical Eng. & Systems 2026-01-19 Siheon Joo , Hongjo Kim

Node embedding refers to techniques that generate low-dimensional vector representations of nodes in a graph while preserving specific properties of the nodes. A key challenge in the field is developing scalable methods that can preserve…

The influence of the microstructural geometry on the behavior of porous media is widely recognized, particularly in geomaterials, but also in biomaterials and engineered materials. Recent advances in imaging techniques, such as X-ray…

Soft Condensed Matter · Physics 2021-07-01 Alexandre Guével , Hadrien Rattez , Manolis Veveakis

Recent studies shows that the majority of existing deep steganalysis models have a large amount of redundancy, which leads to a huge waste of storage and computing resources. The existing model compression method cannot flexibly compress…

Computer Vision and Pattern Recognition · Computer Science 2022-06-14 Shunquan Tan , Qiushi Li , Laiyuan Li , Bin Li , Jiwu Huang

This work reports a new methodology aimed at describing characteristics of protein structural shapes, and suggests a framework in which to resolve or classify automatically such structures into known families. This new approach to protein…

Quantitative Methods · Quantitative Biology 2007-05-23 Marconi Soares Barbosa , Rinaldo Wander Montalvao , Tom Blundell , Luciano da Fontoura Costa

The anatomical axis of long bones is an important reference line for guiding fracture reduction and assisting in the correct placement of guide pins, screws, and implants in orthopedics and trauma surgery. This study investigates an…

Image and Video Processing · Electrical Eng. & Systems 2020-07-07 Florian Kordon , Andreas Maier , Benedict Swartman , Maxim Privalov , Jan Siad El Barbari , Holger Kunze

The emergence of real-time 3D ultrasound (US) makes it possible to consider image-based tracking of subcutaneous soft tissue targets for computer guided diagnosis and therapy. We propose a 3D transrectal US based tracking system for precise…

Other Computer Science · Computer Science 2008-01-17 Michael Baumann , Pierre Mozer , Vincent Daanen , Jocelyne Troccaz

This preliminary study focuses on the development of a medical image segmentation algorithm based on artificial intelligence for calculating bone growth in contact with metallic implants. %as a result of the problem of estimating the growth…

Image and Video Processing · Electrical Eng. & Systems 2022-04-25 Fernando García-Torres , Carmen Mínguez-Porter , Julia Tomás-Chenoll , Sofía Iranzo-Egea , Juan-Manuel Belda-Lois

High-throughput methods for yielding the set of connections in a neural system, the connectome, are now being developed. This tutorial describes ways to analyze the topological and spatial organization of the connectome at the macroscopic…

Neurons and Cognition · Quantitative Biology 2011-12-23 Marcus Kaiser

Purpose: The fusion of transrectal ultrasound (TRUS) and magnetic resonance (MR) images for guiding targeted prostate biopsy has significantly improved the biopsy yield of aggressive cancers. A key component of MR-TRUS fusion is image…

Computer Vision and Pattern Recognition · Computer Science 2018-10-16 Grant Haskins , Jochen Kruecker , Uwe Kruger , Sheng Xu , Peter A. Pinto , Brad J. Wood , Pingkun Yan

Network robustness research aims at finding a measure to quantify network robustness. Once such a measure has been established, we will be able to compare networks, to improve existing networks and to design new networks that are able to…

Discrete Mathematics · Computer Science 2013-11-21 W. Ellens , R. E. Kooij

Network tomography, a classic research problem in the realm of network monitoring, refers to the methodology of inferring unmeasured network attributes using selected end-to-end path measurements. In the research community, network…

Networking and Internet Architecture · Computer Science 2020-01-10 Liang Ma , Ziyao Zhang , Mudhakar Srivatsa

Background and objective: Combined evaluation of lumbosacral structures (e.g. nerves, bone) on multimodal radiographic images is routinely conducted prior to spinal surgery and interventional procedures. Generally, magnetic resonance…

Computer Vision and Pattern Recognition · Computer Science 2018-11-30 Guoxin Fan , Huaqing Liu , Zhenhua Wu , Yufeng Li , Chaobo Feng , Dongdong Wang , Jie Luo , Xiaofei Guan , William M. Wells , Shisheng He

Distance measures play an important role in shape classification and data analysis problems. Topological distances based on Reeb graphs and persistence diagrams have been employed to obtain effective algorithms in shape matching and scalar…

Machine Learning · Computer Science 2023-03-07 Yashwanth Ramamurthi , Amit Chattopadhyay

A major interest in longitudinal neuroimaging studies involves investigating voxel-level neuroplasticity due to treatment and other factors across visits. However, traditional voxel-wise methods are beset with several pitfalls, which can…

Neurons and Cognition · Quantitative Biology 2023-10-19 Suprateek Kundu , Alec Reinhardt , Serena Song , Joo Han , M. Lawson Meadows , Bruce Crosson , Venkatagiri Krishnamurthy

Vertebral body compression fractures are reliable early signs of osteoporosis. Though these fractures are visible on Computed Tomography (CT) images, they are frequently missed by radiologists in clinical settings. Prior research on…

Image and Video Processing · Electrical Eng. & Systems 2020-07-21 Maxim Pisov , Vladimir Kondratenko , Alexey Zakharov , Alexey Petraikin , Victor Gombolevskiy , Sergey Morozov , Mikhail Belyaev

Purpose: To organize a knee MRI segmentation challenge for characterizing the semantic and clinical efficacy of automatic segmentation methods relevant for monitoring osteoarthritis progression. Methods: A dataset partition consisting of 3D…

Neuroscientific data analysis has classically involved methods for statistical signal and image processing, drawing on linear algebra and stochastic process theory. However, digitized neuroanatomical data sets containing labelled neurons,…

Computational Geometry · Computer Science 2018-05-15 Suyi Wang , Xu Li , Partha Mitra , Yusu Wang