Related papers: Ribosome Flow Model on a Ring
As the simplest model of transport of interacting particles in a disordered medium, we consider the asymmetric simple exclusion process (ASEP) in which particles with hard-core interactions perform biased random walks, on the supercritical…
Non-equilibrium systems are often characterized by the transport of some quantity at a macroscopic scale, such as, for instance, a current of particles through a wire. The Asymmetric Simple Exclusion Process (ASEP) is a paradigm for…
The totally asymmetric simple exclusion process (TASEP) is a stochastic model for the unidirectional dynamics of interacting particles on a $1$D-lattice that is much used in systems biology and statistical physics. Its master equation…
The Totally Asymmetric Simple Exclusion Process (TASEP) is a paradigm of out-of-equilibrium Statistical Physics that serves as a simplistic model for one-way vehicular traffic. Since traffic is perturbed by cars cruising for parking in many…
In non-equilibrium statistical mechanics, the Asymmetric Simple Exclusion Process (ASEP) serves as a paradigmatic example. We investigate the spectral characteristics of the ASEP, focusing on the spectral boundary of its generator matrix.…
We formulate and analyze the steady-state behavior of totally asymmetric simple exclusion processes (TASEPs) that contain periodically varying movement rates. In our models, particles at a majority sites hop to the right with rate $p_1$…
We propose an extension of the totally asymmetric simple exclusion process (TASEP) in which particles hopping along a lattice can be blocked by obstacles that dynamically attach/detach from lattice sites. The model can be thought as TASEP…
The dynamics of an asymmetric tracer in the symmetric simple exclusion process (SEP) is mapped, in the continuous scaling limit, to the local current through the origin in the zero-range process (ZRP) with a biased bond. This allows us to…
When the contacts of an open system flip between different reservoirs, the resulting nonequilibrium shows increased dynamical activity. We investigate such active gating for one-dimensional symmetric (SEP) and asymmetric (ASEP) exclusion…
We study the fluctuation properties of the asymmetric simple exclusion process (ASEP) on an infinite one-dimensional lattice. When $N$ particles are initially situated in the negative region with a uniform density $\rho_-=1$, Johansson…
The ribosome flow model on a ring (RFMR) is a deterministic model for translation of a circularized mRNA. We derive a new spectral representation for the optimal steady-state production rate and the corresponding optimal steady-state…
Using the matrix product formalism we formulate a natural p-species generalization of the asymmetric simple exclusion process. In this model particles hop with their own specific rate and fast particles can overtake slow ones with a rate…
The asymmetric simple exclusion process (ASEP) plays the role of a paradigm in non-equilibrium statistical mechanics. We review exact results for the ASEP obtained by Bethe ansatz and put emphasis on the algebraic properties of this model.…
We consider a multi-species generalization of the Asymmetric Simple Exclusion Process on an open chain, in which particles hop with their characteristic hopping rates and fast particles can overtake slow ones. The number of species is…
We study the one dimensional partially asymmetric simple exclusion process (ASEP) with open boundaries, that describes a system of hard-core particles hopping stochastically on a chain coupled to reservoirs at both ends. Derrida, Evans,…
Research in combinatorics has often explored the asymmetric simple exclusion process (ASEP). The ASEP, inspired by examples from statistical mechanics, involves particles of various species moving around a lattice. With the traditional ASEP…
We study the totally asymmetric simple exclusion process (TASEP) on complex networks, as a paradigmatic model for transport subject to excluded volume interactions. Building on TASEP phenomenology on a single segment and borrowing ideas…
We introduce a multi-species generalization of the asymmetric simple exclusion process (ASEP) with a ``no-passing" constraint, forbidding overtaking, on a one-dimensional open chain. This no-passing rule fragments the Hilbert space into an…
The ribosome flow model (RFM) is a phenomenological model for the flow of particles along a 1D chain of $n$ sites. It has been extensively used to study ribosome flow along the mRNA molecule during translation. When the transition rates…
Recent advances in DNA sequencing and fluorescence imaging have made it possible to monitor the dynamics of ribosomes actively engaged in messenger RNA (mRNA) translation. Here, we model these experiments within the inhomogeneous totally…