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Related papers: Programmable DNA-mediated multitasking processor

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Data center networks are experiencing unprecedented exponential growth, mostly driven by the continuous computing demands in machine learning and artificial intelligence algorithms. Within this realm, optical networking offers numerous…

Networking and Internet Architecture · Computer Science 2024-04-16 Zhenyun Xie , David Sánchez-Jácome , Luis Torrijos-Morán , Daniel Pérez-López

DNA nanotechnology uses predictable interactions of nucleic acids to precisely engineer complex nanostructures. Characterizing these self-assembled structures at the single-structure level is crucial for validating their design and…

Biological Physics · Physics 2025-10-21 Wangwei Dong , Zezhou Liu , Ruiyao Liu , Deborah Kuchnir Fygenson , Walter Reisner

A hypercomplex representation of DNA is proposed to facilitate comparison of DNA sequences with fuzzy composition. Using hypercomplex number representation, conventional sequence analysis method, such as, dot matrix analysis, dynamic…

Quantitative Methods · Quantitative Biology 2023-08-03 Jian-Jun Shu , Yajing Li

DNA-mediated multivalent interactions between colloidal particles have been extensively applied for their ability to program bulk phase behaviour and dynamic processes. Exploiting the competition between different types of DNA-DNA bonds,…

Synthetic sequence-controlled polymers promise to transform polymer science by combining the chemical versatility of synthetic polymers with the precise sequence-mediated functionality of biological proteins. However, design of these…

Materials Science · Physics 2025-07-30 Md Mushfiqul Islam , Nishat N. Labiba , Lawrence O. Hall , David S. Simmons

Multiprocessor task scheduling is an important and computationally difficult problem. This paper proposes a comparison study of genetic algorithm and list scheduling algorithm. Both algorithms are naturally parallelizable but have heavy…

Performance · Computer Science 2010-02-08 S. R. Vijayalakshmi , G. Padmavathi

Research on optical computing has recently attracted significant attention due to the transformative advances in machine learning. Among different approaches, diffractive optical networks composed of spatially-engineered transmissive…

Optics · Physics 2022-05-27 Jingxi Li , Yi-Chun Hung , Onur Kulce , Deniz Mengu , Aydogan Ozcan

Application-specific optical processors have been considered disruptive technologies for modern computing that can fundamentally accelerate the development of artificial intelligence (AI) by offering substantially improved computing…

Image and Video Processing · Electrical Eng. & Systems 2021-05-26 Tiankuang Zhou , Xing Lin , Jiamin Wu , Yitong Chen , Hao Xie , Yipeng Li , Jintao Fan , Huaqiang Wu , Lu Fang , Qionghai Dai

We propose a model of a programmable quantum processing device realizable with existing nanophotonic technologies and which can be viewed as a basis for new high performance hardware architectures. We present protocols and their physical…

Digital information can be encoded in the building-block sequence of macro-molecules, such as RNA and single-stranded DNA. Methods of "writing" and "reading" macromolecular strands are currently available, but they are slow and expensive.…

Emerging Technologies · Computer Science 2017-09-14 Masud Mansuripur , Pramod Khulbe

DNA-functionalized particles have great potential for the design of complex self-assembled materials. The major hurdle in realizing crystal structures from DNA-functionalized particles is expected to be kinetic barriers that trap the system…

Soft Condensed Matter · Physics 2015-03-06 Yajun Ding , Jeetain Mittal

The transport of macromolecules, such as DNA, through the cytoskeleton is critical to wide-ranging cellular processes from cytoplasmic streaming to transcription. The rigidity and steric hindrances imparted by the network of filaments…

Reference-guided DNA sequencing and alignment is an important process in computational molecular biology. The amount of DNA data grows very fast, and many new genomes are waiting to be sequenced while millions of private genomes need to be…

Nearly thirty years after its inception, the field of DNA-programmed colloidal self-assembly has begun to realize its initial promise. In this review, we summarize recent developments in designing effective interactions and understanding…

Soft Condensed Matter · Physics 2025-05-08 William M. Jacobs , W. Benjamin Rogers

Multiplication is arguably the most cost-dominant operation in modern deep neural networks (DNNs), limiting their achievable efficiency and thus more extensive deployment in resource-constrained applications. To tackle this limitation,…

Hardware Architecture · Computer Science 2022-12-20 Huihong Shi , Haoran You , Yang Zhao , Zhongfeng Wang , Yingyan Lin

Solid state spin qubits are promising candidates for quantum information processing, but controlled interactions and entanglement in large, multi-qubit systems are currently difficult to achieve. We describe a method for programmable…

DNA storage is now being considered as a new archival storage method for its durability and high information density, but still facing some challenges like high costs and low throughput. By reducing sequencing sample size for decoding…

Information Theory · Computer Science 2025-04-22 Ruiying Cao , Xin Chen

DNA is increasingly employed for bio and nanotechnology thanks to its exquisite versatility and designability. Most of its use is limited to linearised and torsionally relaxed DNA but non-trivial architectures and torsionally constrained --…

Soft Condensed Matter · Physics 2020-09-22 Jan Smrek , Davide Michieletto

As the artificial intelligence community advances into the era of large models with billions of parameters, distributed training and inference have become essential. While various parallelism strategies-data, model, sequence, and…

Machine Learning · Computer Science 2025-03-13 Ruifeng She , Bowen Pang , Kai Li , Zehua Liu , Tao Zhong

Networks of coupled dynamical systems provide a powerful way to model systems with enormously complex dynamics, such as the human brain. Control of synchronization in such networked systems has far reaching applications in many domains,…

Adaptation and Self-Organizing Systems · Physics 2018-03-21 Julien Gout , Markus Quade , Kamran Shafi , Robert K. Niven , Markus Abel
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