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The spread in time of a mutation through a population is studied analytically and computationally in fully-connected networks and on spatial lattices. The time, t_*, for a favourable mutation to dominate scales with population size N as…

Populations and Evolution · Quantitative Biology 2007-05-23 C. J. Paley , S. N. Taraskin , S. R. Elliott

A dynamical model based on a continuous addition of colored shot noises is presented. The resulting process is colored and non-Gaussian. A general expression for the characteristic function of the process is obtained, which, after a scaling…

Statistical Mechanics · Physics 2009-10-31 Jaume Masoliver , Miquel Montero , Alan McKane

We study the effects of scattering lengths on L\'evy walks in quenched one-dimensional random and fractal quasi-lattices, with scatterers spaced according to a long-tailed distribution. By analyzing the scaling properties of the random-walk…

Statistical Mechanics · Physics 2015-03-20 R. Burioni , S. di Santo , S. Lepri , A. Vezzani

Recent experiments (G. Ariel, et al., Nature Comm. 6, 8396 (2015)) revealed an intriguing behavior of swarming bacteria: they fundamentally change their collective motion from simple diffusion into a superdiffusive L\'{e}vy walk dynamics.…

Statistical Mechanics · Physics 2017-04-05 Sergei Fedotov , Nickolay Korabel

Long tails in the velocity distribution are observed in plasmas and gravitational systems. Some experiments and observations in far-from-equilibrium conditions show that these tails behave as 1/v^(5/2). We show here that such heavy tails…

Plasma Physics · Physics 2016-05-20 L. Brenig , Y. Chaffi , T. M. Rocha Filho

We are interested in modeling Darwinian evolution resulting from the interplay of phenotypic variation and natural selection through ecological interactions. The population is modeled as a stochastic point process whose generator captures…

Probability · Mathematics 2011-02-01 Benjamin Jourdain , Sylvie Méléard , Wojbor Woyczynski

Edwards et al question aspects of the methods used in two of our published papers that report results showing Levy walk like and Levy flight movement patterns of marine predators.The criticisms are focused on the applicability of some…

Populations and Evolution · Quantitative Biology 2012-10-09 David W. Sims , Nicolas E. Humphries

Jim Shapiro synthesizes a great many observations about the mechanisms of evolution to reach the remarkable conclusion that large-scale modification, exchange, and rearrangement of the genome are common and should be viewed as fundamental…

Populations and Evolution · Quantitative Biology 2015-06-18 Michael W. Deem

A model describing the dynamics related to the spreading of non-lethal infectious diseases in a fixed-size population is proposed. The model consists of a non-linear delay-differential equation describing the time evolution of the increment…

Populations and Evolution · Quantitative Biology 2010-10-05 A. Noviello , F. Romeo , R. De Luca

The L\'evy, jumping process, defined in terms of the jumping size distribution and the waiting time distribution, is considered. The jumping rate depends on the process value. The fractional diffusion equation, which contains the variable…

Statistical Mechanics · Physics 2009-06-10 Tomasz Srokowski

In biology, the evolution of increasingly cooperative groups has shaped the history of life. Genes collaborate in the control of cells; cells efficiently divide tasks to produce cohesive multicellular individuals; individual members of…

Populations and Evolution · Quantitative Biology 2011-12-15 Steven A. Frank

The outcomes of evolution are determined by which mutations occur and fix. In rapidly adapting microbial populations, this process is particularly hard to predict because lineages with different beneficial mutations often spread…

Populations and Evolution · Quantitative Biology 2014-02-17 Evgeni M. Frenkel , Benjamin H. Good , Michael M. Desai

Evolution equations for parton distributions can be approximately diagonalized and solved in moment space without assuming any knowledge of the parton distribution in the region of small x. The evolution algorithm for truncated moments is…

High Energy Physics - Phenomenology · Physics 2007-05-23 Lorenzo Magnea , Stefano Forte

We consider correlated L\'evy walks on a class of two- and three-dimensional deterministic self-similar structures, with correlation between steps induced by the geometrical distribution of regions, featuring different diffusion properties.…

Statistical Mechanics · Physics 2015-03-19 Pierfrancesco Buonsante , Raffaella Burioni , Alessandro Vezzani

Starting from the model of continuous time random walk, we focus our interest on random walks in which the probability distributions of the waiting times and jumps have fat tails characterized by power laws with exponent between 0 and 1 for…

Probability · Mathematics 2008-01-03 Rudolf Gorenflo , Entsar A. A. Abdel-Rehim

The bacterium E. coli maneuvers itself to regions with high chemoattractant concentrations by performing two stereotypical moves: `runs', in which it moves in near straight lines, and `tumbles', in which it does not advance but changes…

Cell Behavior · Quantitative Biology 2007-11-29 Yariv Kafri , Rava Azeredo da Silveira

Spatial constraints such as rigid barriers affect the dynamics of cell populations, potentially altering the course of natural evolution. In this paper, we investigate the population genetics of Escherichia coli proliferating in…

Populations and Evolution · Quantitative Biology 2022-03-28 Anzhelika Koldaeva , Hsieh-Fu Tsai , Amy Q. Shen , Simone Pigolotti

With a view to connecting random mutation on the molecular level to punctuated equilibrium behavior on the phenotype level, we propose a new model for biological evolution, which incorporates random mutation and natural selection. In this…

Condensed Matter · Physics 2009-10-28 M. Y. Choi , H. Y. Lee , D. Kim , S. H. Park

In a general class of one dimensional random differential equation the convergence of the distribution function of the solution to stationary state distribution is studied. In particular it is proved the boundedness respectively the…

Probability · Mathematics 2010-07-07 Gyorgy Steinbrecher , Xavier Garbet , Boris Weyssow

It is widely accepted that population genetics theory is the cornerstone of evolutionary analyses. Empirical tests of the theory, however, are challenging because of the complex relationships between space, dispersal, and evolution.…

Populations and Evolution · Quantitative Biology 2011-10-26 Kirill S. Korolev , Joao B. Xavier , David R. Nelson , Kevin R. Foster