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In this paper we investigate the role of native geometry on the kinetics of protein folding based on simple lattice models and Monte Carlo simulations. Results obtained within the scope of the Miyazawa-Jernigan indicate the existence of two…

Biomolecules · Quantitative Biology 2007-05-23 P. F. N. Faisca , M. M. Telo da Gama

There has been a resurgence of interest in using origami principles--along with $2$D materials--to design a wide array of nanoscale devices. In this work, we take cognizance of the fact that small-scale devices are vulnerable to entropic…

Statistical Mechanics · Physics 2024-01-09 Matthew Grasinger , Pradeep Sharma

Recently, a new connection between density functional theory and kinetic theory has been proposed. In particular, it was shown that the Kohn-Sham (KS) equations can be reformulated as a macroscopic limit of the steady-state solution of a…

Chemical Physics · Physics 2015-10-28 M. Mendoza , H. J. Herrmann , S. Succi

We propose a novel computational framework for modeling and simulating origami structures. In this framework, bilinear solid-shell elements are employed to model the origami panels while crease folding is considered through the angle…

Graphics · Computer Science 2026-01-05 Qixin Liang

Chemical, mechanical, thermal and/or electronic properties of bulk or low-dimensional materials can be engineered by introducing structural defects to form novel functionalities. When using particles irradiation, these defects can be…

Materials Science · Physics 2022-02-07 L. Basta , A. Moscardini , S. Veronesi , F. Bianco

Origami as a deployable structure offers the unique advantage of achieving compact stowage via flat-folding while forming a well-defined surface composed of rigid panels upon deployment. However, since origami consists of flat facets, it is…

Soft Condensed Matter · Physics 2025-11-27 Byoung-Gyu Kim , Geon Hee Cho , Hak-Tae Lee , Jinkyu Yang

We study the electronic structure of the junctions between a single graphene layer and carbon nanotubes, using a tight-binding model and the continuum theory based on Dirac fermion fields. The latter provides a unified description of…

Mesoscale and Nanoscale Physics · Physics 2013-05-29 J. Gonzalez , F. Guinea , J. Herrero

We study edge state magnetism in graphene nanostructures using a mean field theory of the Hubbard model. We investigate how the magnetism of the zigzag edges of graphene is affected by the presence of other types of terminating edges and…

Mesoscale and Nanoscale Physics · Physics 2008-07-04 Somnath Bhowmick , Vijay B. Shenoy

Modeling folding surfaces with nonzero thickness is of practical interest for mechanical engineering. There are many existing approaches that account for material thickness in folding applications. We propose a new systematic and broadly…

Computational Geometry · Computer Science 2016-01-22 Jason S. Ku , Erik D. Demaine

We introduce quantum dimer models on lattices made of corner-sharing triangles. These lattices includes the kagome lattice and can be defined in arbitrary geometry. They realize fully disordered and gapped dimer-liquid phase with…

Strongly Correlated Electrons · Physics 2011-07-19 G. Misguich , D. Serban , V. Pasquier

Electronic structures of the zigzag bilayer graphite nanoribbons(Z-BGNR) with various ribbon width $N$ are studied within the tight binding approximation. Neglecting the inter-layer hopping amplitude $\gamma_4$, which is an order of…

Mesoscale and Nanoscale Physics · Physics 2009-11-13 Jun-Won Rhim , Kyungsun Moon

We report, through experimental observations and computer simulations, that atomic lattice interlocking can determine whether an object rolls or slides on a surface. We have quantitatively manipulated carbon nanotubes (CNTs) on a variety of…

Condensed Matter · Physics 2007-05-23 M. R. Falvo , J. Steele , A. Buldum , J. D. Schall , R. M. Taylor , J. P. Lu , D. W. Brenner , R. Superfine

We carried out measurements on nanoelectromechanical systems based on multilayer graphene sheets suspended over trenches in silicon oxide. The motion of the suspended sheets was electrostatically driven at resonance using applied…

Mesoscale and Nanoscale Physics · Physics 2015-05-13 D. Garcia-Sanchez , A. M. van der Zande , A. San Paulo , B. Lassagne , P. L. McEuen , A. Bachtold

We present a simple, accessible method for autonomously transforming flat plastic sheets into intricate three-dimensional structures using only uniform heating and common tools such as household ovens and scissors. Our approach combines…

Robotics · Computer Science 2025-07-01 Mrunmayi Mungekar , Sanjith Menon , M. Ravi Shankar , M. Khalid Jawed

We derive the generalized magneto-absorption spectra for curved graphene nanorib- bons and carbon nanotubes by using the Peierls tight-binding model. The main spectral characteristics and the optical selection rules result from the…

Materials Science · Physics 2016-11-02 Chiun-Yan Lin , Jhao-Ying Wu , Cheng-Pong Chang , Ming-Fa Lin

Antiferromagnetism in stacked nanographite is investigated with using the Hubbard-type model. We find that the open shell electronic structure can be an origin of the decreasing magnetic moment with the decrease of the inter-graphene…

Ever since the discovery of graphene and subsequent explosion of interest in single atom thick materials, studying their mechanical properties has been an active area of research. New length scales often necessitate a rethinking of physical…

We have designed and realized magnetic trapping geometries for ultracold atoms based on permanent magnetic films. Magnetic chip based experiments give a high level of control over trap barriers and geometric boundaries in a compact…

Atomic Physics · Physics 2019-02-13 A. L. La Rooij , H. B. van Linden van den Heuvell , R. J. C. Spreeuw

Off-equilibrium dynamics of a three-dimensional lattice model with nearest- and next nearest-neighbors exclusions is studied. At equilibrium, the model undergoes a first-order fluid-solid transition. Non-equilibrium filling, through random…

Statistical Mechanics · Physics 2015-05-30 H. Levit , Z. Rotman , E. Eisenberg

In the current cosmological paradigm, an initially flat three-dimensional manifold that pervades space (the `dark-matter sheet') folds up to build concentrations of mass (galaxies), and a cosmic web between them. Galaxies are nodes,…

Cosmology and Nongalactic Astrophysics · Physics 2015-06-17 Mark C. Neyrinck
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