Related papers: Computing Runs on a General Alphabet
A run is a maximal occurrence of a repetition $v$ with a period $p$ such that $2p \le |v|$. The maximal number of runs in a string of length $n$ was studied by several authors and it is known to be between $0.944 n$ and $1.029 n$. We…
In this work, we study the relative hardness of fundamental problems with state-of-the-art word RAM algorithms that take $O(n\sqrt{\log n})$ time for instances described in $\Theta(n)$ machine words ($\Theta(n\log n)$ bits). This complexity…
We are considering RAMs $N_{n}$, with wordlength $n=2^{d}$, whose arithmetic instructions are the arithmetic operations multiplication and addition modulo $2^{n}$, the unary function $ \min\lbrace 2^{x}, 2^{n}-1\rbrace$, the binary…
The online square detection problem is to detect the first occurrence of a square in a string whose characters are provided as input one at a time. Recall that a square is a string that is a concatenation of two identical strings. In this…
We study algorithms for solving three problems on strings. The first one is the Most Frequently String Search Problem. The problem is the following. Assume that we have a sequence of $n$ strings of length $k$. The problem is finding the…
We revisit a fundamental problem in string matching: given a pattern of length m and a text of length n, both over an alphabet of size $\sigma$, compute the Hamming distance between the pattern and the text at every location. Several…
In the literature of algorithms, the specific computation model is often not explicit as it is assumed that the model of computation is the RAM (Random Access Machine) model. However, the RAM model itself is ill-founded in the literature,…
In the k-mappability problem, we are given a string x of length n and integers m and k, and we are asked to count, for each length-m factor y of x, the number of other factors of length m of x that are at Hamming distance at most k from y.…
This paper presents an algebraic theory of instruction sequences with instructions for a random access machine (RAM) as basic instructions, the behaviours produced by the instruction sequences concerned under execution, and the interaction…
Finding the length of the longest increasing subsequence (LIS) is a classic algorithmic problem. Let $n$ denote the size of the array. Simple $O(n\log n)$ algorithms are known for this problem. We develop a polylogarithmic time randomized…
This work is a Master thesis supervised by Prof. Dr. H.W. Lenstra. Lenstra and Silverberg showed that each reduced order has a universal grading, which can be viewed as the `largest possible grading'. We present an algorithm to compute the…
We present a new on-line algorithm for computing the Lempel-Ziv factorization of a string that runs in $O(N\log N)$ time and uses only $O(N\log\sigma)$ bits of working space, where $N$ is the length of the string and $\sigma$ is the size of…
We revisit two well-known algorithmic problems on strings: computing a shortest unique substring (SUS) and a shortest absent substring (SAS) of a string $S$ of length $n$. Both problems admit folklore $\mathcal{O}(n)$-time solutions using…
We study the space requirements of a sorting algorithm where only items that at the end will be adjacent are kept together. This is equivalent to the following combinatorial problem: Consider a string of fixed length n that starts as a…
We present an $O(n\sqrt{\log n})$ time and linear space algorithm for sorting real numbers. This breaks the long time illusion that real numbers have to be sorted by comparison sorting and take $\Omega (n\log n)$ time to be sorted.
We are concerned with estimating alphabet size $N$ from a stream of symbols taken uniformly at random from that alphabet. We define and analyze a memory-restricted variant of an algorithm that have been earlier proposed for this purpose.…
We study approximation algorithms for the following geometric version of the maximum coverage problem: Let P be a set of n weighted points in the plane. We want to place m a * b rectangles such that the sum of the weights of the points in P…
We consider the Abelian longest common factor problem in two scenarios: when input strings are uncompressed and are of size $n$, and when the input strings are run-length encoded and their compressed representations have size at most $m$.…
Given a word $w$ and a Parikh vector $\mathcal{P}$, an abelian run of period $\mathcal{P}$ in $w$ is a maximal occurrence of a substring of $w$ having abelian period $\mathcal{P}$. We give an algorithm that finds all the abelian runs of…
A curious property of randomized log-space search algorithms is that their outputs are often longer than their workspace. This leads to the question: how can we reproduce the results of a randomized log space computation without storing the…