Related papers: Simplicial and Cellular Trees
Phylogenetic networks are becoming of increasing interest to evolutionary biologists due to their ability to capture complex non-treelike evolutionary processes. From a combinatorial point of view, such networks are certain types of rooted…
The recently introduced A-homotopy groups for graphs are investigated. The main concern of the present article is the construction of an infinite cell complex, the homotopy groups of which are isomorphic to the A-homotopy groups of the…
Treewidth is a graph parameter of fundamental importance to algorithmic and structural graph theory. This paper surveys several graph parameters tied to treewidth, including separation number, tangle number, well-linked number and Cartesian…
We investigate the tractability of a simple fusion of two fundamental structures on graphs, a spanning tree and a perfect matching. Specifically, we consider the following problem: given an edge-weighted graph, find a minimum-weight…
The complexity of a graph is the number of its labeled spanning trees. It is demonstrated that the seven known triangle-free strongly regular graphs, such as the Higman-Sims graph, are graphs of maximal complexity among all graphs of the…
In this paper, we introduce a new method to compute magnitude homology of general graphs. To each direct sum component of magnitude chain complexes, we assign a pair of simplicial complexes whose simplicial chain complex is isomorphic to…
Asymptotic analysis on some statistical properties of the random binary-tree model is developed. We quantify a hierarchical structure of branching patterns based on the Horton-Strahler analysis. We introduce a transformation of a binary…
The displayed tree phylogenetic network model is shown to sit as a natural submodel of the graphical model associated to a directed acyclic graph (DAG). This representation allows to derive a number of results about the displayed tree…
The classical matrix-tree theorem relates the determinant of the combinatorial Laplacian on a graph to the number of spanning trees. We generalize this result to Laplacians on one- and two-dimensional vector bundles, giving a combinatorial…
A decision tree looks like a simple directed acyclic computational graph, where only the leaf nodes specify the output values and the non-terminals specify their tests or split conditions. From the numerical perspective, we express decision…
Tangle-tree theorems are an important tool in structural graph theory, and abstract separation systems are a very general setting in which tangle-tree theorems can still be formulated and proven. For infinite abstract separation systems, so…
In this work, we consider an extension of graphical models to random graphs, trees, and other objects. To do this, many fundamental concepts for multivariate random variables (e.g., marginal variables, Gibbs distribution, Markov properties)…
Understanding the origins of complexity is a fundamental challenge with implications for biological and technological systems. Network theory emerges as a powerful tool to model complex systems. Networks are an intuitive framework to…
One of the main virtues of trees is to represent formal solutions of various functional equations which can be cast in the form of fixed point problems. Basic examples include differential equations and functional (Lagrange) inversion in…
A $\mathbb{T}$-gain graph is a simple graph in which a unit complex number is assigned to each orientation of an edge, and its inverse is assigned to the opposite orientation. The associated adjacency matrix is defined canonically, and is…
Directed acyclic graphs are a fundamental class of networks that includes citation networks, food webs, and family trees, among others. Here we define a random graph model for directed acyclic graphs and give solutions for a number of the…
We give a proof for sharp estimate for the number of spanning trees using linear algebra and generalize this bound to multigraphs. In addition, we show that this bound is tight for complete graphs. In addition, we give estimates for number…
For $d\ge 2$ and an odd prime power $q$, consider the vector space $\mathbb{F}_q^d$ over the finite field $\mathbb{F}_q$, where the distance between two points $(x_1,\ldots,x_d)$ and $(y_1,\ldots,y_d)$ is defined as $\sum_{i=1}^d…
Two classical concepts of centrality in a graph are the median and the center. The connected notions of the status and the radius of a graph seem to be in no relation. In this paper, however, we show a clear connection of both concepts, as…
We study the evolution of graphs densifying by adding edges: Two vertices are chosen randomly, and an edge is (i) established if each vertex belongs to a tree; (ii) established with probability $p$ if only one vertex belongs to a tree;…