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To a rational homology sphere graph manifold one can associate a weighted tree invariant called splice diagram. In this article we prove a sufficient numerical condition on the splice diagram for a graph manifold to be a singularity link.…

Geometric Topology · Mathematics 2008-12-18 Helge Møller Pedersen

Bayesian networks faithfully represent the symmetric conditional independences existing between the components of a random vector. Staged trees are an extension of Bayesian networks for categorical random vectors whose graph represents…

Machine Learning · Statistics 2022-03-10 Manuele Leonelli , Gherardo Varando

We study the problem of computing the homology of the configuration spaces of a finite cell complex $X$. We proceed by viewing $X$, together with its subdivisions, as a subdivisional space--a kind of diagram object in a category of cell…

Algebraic Topology · Mathematics 2021-01-11 Byung Hee An , Gabriel C. Drummond-Cole , Ben Knudsen

An order-theoretic forest is a countable partial order such that the set of elements larger than any element is linearly ordered. It is an order-theoretic tree if any two elements have an upper-bound. The order type of a branch can be any…

Logic in Computer Science · Computer Science 2023-06-22 Bruno Courcelle

Two graph parameters are said to be coarsely equivalent if they are within constant factors from each other for every graph $G$. Recently, several graph parameters were shown to be coarsely equivalent to tree-length. Recall that the length…

Combinatorics · Mathematics 2025-02-04 Feodor F. Dragan

Over thirty years ago, Kalai proved a beautiful $d$-dimensional analog of Cayley's formula for the number of $n$-vertex trees. He enumerated $d$-dimensional hypertrees weighted by the squared size of their $(d-1)$-dimensional homology…

Combinatorics · Mathematics 2018-01-09 Nati Linial , Yuval Peled

In this paper we construct spanning trees in hyperbolic graphs that represent their hyperbolic compactification in a good way: so that the tree has a bounded number of distinct rays to each boundary point. The bound depends only on the…

Combinatorics · Mathematics 2013-01-31 Matthias Hamann

We give two combinatorial proofs of an elegant product formula for the number of spanning trees of the $n$-dimensional hypercube. The first proof is based on the assertion that if one chooses a uniformly random rooted spanning tree of the…

Combinatorics · Mathematics 2012-07-13 Olivier Bernardi

Traditional random graph models of networks generate networks that are locally tree-like, meaning that all local neighborhoods take the form of trees. In this respect such models are highly unrealistic, most real networks having strongly…

Statistical Mechanics · Physics 2011-03-02 Brian Karrer , M. E. J. Newman

Recently, so-called treebased phylogenetic networks have gained considerable interest in the literature, where a treebased network is a network that can be constructed from a phylogenetic tree, called the base tree, by adding additional…

Populations and Evolution · Quantitative Biology 2019-11-28 Mareike Fischer , Michelle Galla , Lina Herbst , Yangjing Long , Kristina Wicke

The availability of graph data with node attributes that can be either discrete or real-valued is constantly increasing. While existing kernel methods are effective techniques for dealing with graphs having discrete node labels, their…

Machine Learning · Computer Science 2024-10-30 Giovanni Da San Martino , Nicolò Navarin , Alessandro Sperduti

Given a graph, we can form a spanning forest by first sorting the edges in some order, and then only keep edges incident to a vertex which is not incident to any previous edge. The resulting forest is dependent on the ordering of the edges,…

Combinatorics · Mathematics 2018-02-16 Steve Butler , Misa Hamanaka , Marie Hardt

We consider the topology of real no $k$-equal spaces via the theory of cellular spanning trees. Our main theorem proves that the rank of the $(k-2)$-dimensional homology of the no $k$-equal subspace of $\mathbb{R}$ is equal to the number of…

Combinatorics · Mathematics 2017-08-02 Yuliy Baryshnikov , Caroline Klivans , Nicholas Kosar

Any Boolean function corresponds with a complete full binary decision tree. This tree can in turn be represented in a maximally compact form as a direct acyclic graph where common subtrees are factored and shared, keeping only one copy of…

Data Structures and Algorithms · Computer Science 2020-05-26 Julien Clément , Antoine Genitrini

Network topology is a fundamental aspect of network science that allows us to gather insights into the complicated relational architectures of the world we inhabit. We provide a first specific study of neighbourhood degree sequences in…

Social and Information Networks · Computer Science 2019-06-11 Keith M. Smith

Generalizing the classical matrix-tree theorem we provide a formula counting subgraphs of a given graph with a fixed 2-core. We use this generalization to obtain an analog of the matrix-tree theorem for the root system $D_n$ (the classical…

Combinatorics · Mathematics 2007-05-23 Yurii Burman , Boris Shapiro

A generalized Fourier analysis on arbitrary graphs calls for a detailed knowledge of the eigenvectors of the graph Laplacian. Using the symmetries of the Cayley tree, we recursively construct the family of eigenvectors with exponentially…

Statistical Mechanics · Physics 2019-10-31 Ayşe Erzan , Aslı Tuncer

This paper studies the structure of graphs with given tree-width and excluding a fixed complete bipartite subgraph, which generalises the bounded degree setting. We give a new structural description of such graphs in terms of so-called…

Combinatorics · Mathematics 2025-12-15 Chun-Hung Liu , David R. Wood

Daily internet communication relies heavily on tree-structured graphs, embodied by popular data formats such as XML and JSON. However, many recent generative (probabilistic) models utilize neural networks to learn a probability distribution…

Machine Learning · Computer Science 2024-08-20 Milan Papež , Martin Rektoris , Tomáš Pevný , Václav Šmídl

Given a graph or a matroid, a tree of tangles is a tree decomposition that displays the structure of the connectivity: every edge of the decomposition tree induces a separation, that is, a way to divide the graph or matroid into two parts;…

Combinatorics · Mathematics 2023-02-06 Ann-Kathrin Elm