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Based on a newly developed contact-density chain-growth algorithm, we have simulated a nongrafted peptide in the vicinity of different attractive substrates. We analyzed the specificity of the peptide adsorption by focussing on the…

Soft Condensed Matter · Physics 2007-10-24 Michael Bachmann , Wolfhard Janke

The problem of a random walk on a finite triangular lattice with a single interior source point and zig-zag absorbing boundaries is solved exactly. This problem has been previously considered intractable.

Mathematical Physics · Physics 2009-11-07 M. T. Batchelor , B. I. Henry

A lattice walk model is said to be reluctant if the defining step set has a strong drift towards the boundaries. We describe efficient random generation strategies for these walks.

Combinatorics · Mathematics 2016-03-22 Jeremie Lumbroso , Marni Mishna , Yann Ponty

We study a restricted class of self-avoiding walks (SAW) which start at the origin (0, 0), end at $(L, L)$, and are entirely contained in the square $[0, L] \times [0, L]$ on the square lattice ${\mathbb Z}^2$. The number of distinct walks…

Statistical Mechanics · Physics 2016-08-31 M. Bousquet-Mélou , A. J. Guttmann , I. Jensen

We introduce several bilocal algorithms for lattice self-avoiding walks that provide reasonable models for the physical kinetics of polymers in the absence of hydrodynamic effects. We discuss their ergodicity in different confined…

High Energy Physics - Lattice · Physics 2007-05-23 Sergio Caracciolo , Maria Serena Causo , Giovanni Ferraro , Mauro Papinutto , Andrea Pelissetto

Polymer adsorption on fractally rough walls of varying dimensionality is studied by renormalization group methods on hierarchical lattices. Exact results are obtained for deterministic walls. The adsorption transition is found continuous…

Statistical Mechanics · Physics 2007-05-23 G. Giugliarelli , A. L. Stella

We have performed multicanonical chain-growth simulations of a polymer interacting with an adsorbing surface. The polymer, which is not explicitly anchored at the surface, experiences a hierarchy of phase transitions between conformations…

Statistical Mechanics · Physics 2009-11-11 Michael Bachmann , Wolfhard Janke

Tip-driven growth processes underlie the development of many plants. To date, tip-driven growth processes have been modelled as an elongating path or series of segments without taking into account lateral expansion during elongation.…

Biological Physics · Physics 2014-01-24 Alexander Bucksch , Greg Turk , Joshua S. Weitz

We study uniform 3-star polymers with one branch tethered to an attractive surface and another branch pulled by a force away from the surface. Each branch of the 3-star lattice is modelled as a self-avoiding walk on the simple cubic lattice…

Statistical Mechanics · Physics 2019-05-30 C J Bradly , A L Owczarek

We introduce a fast implementation of the pivot algorithm for self-avoiding walks, which we use to obtain large samples of walks on the cubic lattice of up to $33 \times 10^6$ steps. Consequently the critical exponent $\nu$ for…

Statistical Mechanics · Physics 2010-02-03 Nathan Clisby

Random walks are powerful tools to analyze spatial-temporal patterns produced by living organisms ranging from cells to humans. At the same time, it is evident that these patterns are not completely random but are results of a convolution…

Statistical Mechanics · Physics 2021-12-08 M. I. Krivonosov , S. N. Tikhomirov , S. Denisov

A previous paper (hep-lat/9311011) proposed a new kind of random walk on a spherically-symmetric lattice in arbitrary noninteger dimension $D$. Such a lattice avoids the problems associated with a hypercubic lattice in noninteger dimension.…

High Energy Physics - Lattice · Physics 2009-10-22 C. M. Bender , S. Boettcher , M. Moshe

In this work, we present a simple and efficient generator of polymeric linear chains, based on a random self-avoiding walk process. The chains are generated using a discrete process of growth, in cubic networks and in a finite time, without…

Statistical Mechanics · Physics 2020-03-09 David R. Avellaneda B. , Ramón E. R. González

Random walks describe diffusion processes, where movement at every time step is restricted to only the neighbouring locations. We construct a quantum random walk algorithm, based on discretisation of the Dirac evolution operator inspired by…

Quantum Physics · Physics 2015-03-13 Apoorva Patel , Md. Aminoor Rahaman

We present the exact solutions of various directed walk models of polymers confined to a slit and interacting with the walls of the slit via an attractive potential. We consider three geometric constraints on the ends of the polymer and…

Statistical Mechanics · Physics 2009-11-11 R Brak , A L Owczarek , A Rechnitzer , S G Whittington

We consider a discrete time particle model for kinetic transport on the two dimensional integer lattice. The particle can move due to advection in the $x$-direction and due to dispersion. This happens when the particle is free, but it can…

Probability · Mathematics 2015-08-04 Michel Dekking , Derong Kong , Annegreet van Opbroek

The $N$-step random walk, elongated in the vicinity of a disc (in 2D) or a sphere (in 3D) of radius $R$, demonstrates a non-algebraic stretched exponential decay $P_N\sim \exp\left(-{\rm const}\, N^{1/3}\right)$ for the first return…

Statistical Mechanics · Physics 2026-01-06 Daniil Fedotov , Sergei Nechaev

We provide an introductory account of a tricritical phase diagram, in the setting of a mean-field random walk model of a polymer density transition, and clarify the nature of the density transition in this context. We consider a…

Mathematical Physics · Physics 2020-11-25 Roland Bauerschmidt , Gordon Slade

We enumerate self-avoiding walks and polygons, counted by perimeter, on the quasiperiodic rhombic Penrose and Ammann-Beenker tilings, thereby considerably extending previous results. In contrast to similar problems on regular lattices,…

Statistical Mechanics · Physics 2008-08-28 A. N. Rogers , C. Richard , A. J. Guttmann

We study a one-dimensional sluggish random walk with space-dependent transition probabilities between nearest-neighbour lattice sites. Motivated by trap models of slow dynamics, we consider a model in which the trap depth increases…

Statistical Mechanics · Physics 2023-04-12 Aniket Zodage , Rosalind J. Allen , Martin R. Evans , Satya N. Majumdar