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Trajectories and conformations of uni- and multiflagellar bacteria are studied with a coarse-grained model of a cell comprised of elastic flagella connected to a cell body. The elasticities of both the hook protein (connecting cell body and…

Biological Physics · Physics 2018-11-07 Frank T. M. Nguyen , Michael D. Graham

Peritrichous bacteria synchronize and bundle their flagella to actively swim while disruption of the bundle leads to tumbling. It is still not known whether the number of flagella represents an evolutionary adaptation towards optimizing…

Biological Physics · Physics 2020-04-21 Javad Najafi , M. Reza Shaebani , Thomas John , Florian Altegoer , Gert Bange , Christian Wagner

Cellular metabolism, the integrated interconversion of thousands of metabolic substrates through enzyme-catalyzed biochemical reactions, is the most investigated complex intercellular web of molecular interactions. While the topological…

Molecular Networks · Quantitative Biology 2015-06-26 E. Almaas , B. Kovacs , T. Vicsek , Z. N. Oltvai , A. -L. Barabasi

Self-organized dynamic patterns in dense active matter are striking manifestations of non-equilibrium physics. A prominent example is the macroscopic elliptical motion observed in quasi-2D bacterial suspensions, which has lacked a physical…

Soft Condensed Matter · Physics 2026-03-30 Bing Miao , Lei-Han Tang

We study a two-dimensional model of an active isotropic colloid whose propulsion is linked to the interactions between solute particles of the bath. The colloid catalyzes a chemical reaction in its vicinity, that yields a local phase…

Soft Condensed Matter · Physics 2022-12-07 Jeanne Decayeux , Marie Jardat , Pierre Illien , Vincent Dahirel

The fluctuation-dissipation theorem describes the intimate connection between the Brownian diffusion of thermal particles and their drag coefficients. In the simple case of spherical particles, it takes the form of the Stokes-Einstein…

Swimming eukaryotic microorganisms such as spermatozoa, algae and ciliates self-propel in viscous fluids using travelling wave-like deformations of slender appendages called flagella. Waves are predominant because Purcell's scallop theorem…

Fluid Dynamics · Physics 2020-11-18 Eric Lauga

Whirling and swerving, a bacterium is swimming in a test tube, foraging for food. On the surface of a vibrating bath, a droplet starts walking. A certain similarity, but mostly dissimilarity, between the physical memory that emerges in…

Populations and Evolution · Quantitative Biology 2020-11-24 Albert Libchaber , Tsvi Tlusty

We demonstrate with experiments and simulations how microscopic self-propelled particles navigate through environments presenting complex spatial features, which mimic the conditions inside cells, living organisms and future lab-on-a-chip…

Biological Physics · Physics 2011-09-22 Giovanni Volpe , Ivo Buttinoni , Dominik Vogt , Hans-Juergen Kuemmerer , Clemens Bechinger

Motile bacteria can migrate along chemical gradients in a process known as chemotaxis. When exposed to uniform environmental stress, Escherichia coli cells coordinate their chemotactic responses to form millimeter-sized condensates…

Biological Physics · Physics 2025-05-02 Nir Livne , Ady Vaknin , Oded Agam

We present in this fluid dynamics video a novel experimental setup with self-propelled swimmers on a free surface. The swimmers, modeled as flexible thin filaments, are subjected to external electromagnetic forcing driving a propagating…

Fluid Dynamics · Physics 2014-11-04 Sophie Ramananarivo , Benjamin Thiria , Ramiro Godoy-Diana

Motivated by the aim of understanding the effect of media heterogeneity on the swimming dynamics of flagellated bacteria, we study the rotation and swimming of rigid helices in dilute suspensions experimentally and theoretically. We first…

Fluid Dynamics · Physics 2024-11-27 Albane Théry , Andres Zambrano , Eric Lauga , Roberto Zenit

Bacteria commonly inhabit porous environments such as host tissues, soil, and marine sediments, where complex geometries constrain and redirect their motion. Although bacterial motility has been studied in porous media, the roles of cell…

Soft Condensed Matter · Physics 2025-12-22 David Gao , Zeyuan Wang , Mihika Jain , Arnold J. T. M. Mathijssen , Ran Tao

Active colloidal microswimmers serve as archetypical active fluid systems, and as models for biological swimmers. Here, by studying in detail their velocity traces, we find robust power-law intermittency with system-dependent exponential…

Soft Condensed Matter · Physics 2023-10-27 Nick Oikonomeas-Koppasis , Stefania Ketzetzi , Daniela J. Kraft , Peter Schall

E.coli serves as prototype for the study of peritrichous enteric bacteria that perform runs and tumbles alternately. Bacteria run forward as a result of the counterclockwise (CCW) rotation of their flagella bundle and perform tumbles when…

Biological Physics · Physics 2019-11-05 G. Fier , D. Hansmann , R. C. Buceta

Active fluids are a class of non-equilibrium systems where energy is injected into the system continuously by the constituent particles themselves. Many examples, such as bacterial suspensions and actomyosin networks, are intrinsically…

Soft Condensed Matter · Physics 2017-06-26 Elsen Tjhung , Michael E. Cates , Davide Marenduzzo

Escherichia coli bacterium is a rod-shaped organism composed of a complex double membrane structure. Knowledge of electric field driven ion transport through both membranes and the evolution of their induced permeabilization has important…

Biomolecules · Quantitative Biology 2023-11-30 Juan González-Cuevas , Ricardo Argüello , Marcos Florentin , Franck M. André , Lluis Mir

Self-propelled point-like particles move along circular trajectories when their translocation velocity is constant and the angular velocity related to their orientation vector is also constant. We investigate the collective behavior of…

Biological Physics · Physics 2014-02-04 Yingzi Yang , Feng Qiu , Gerhard Gompper

Dense bacterial suspensions exhibit turbulent-like flows at low Reynolds numbers, driven by the activity of the microswimmers. In this study, we develop a model system to examine these dynamics using motile colloids that mimic bacterial…

Fluid Dynamics · Physics 2025-02-25 Rui Luo , Alexey Snezhko , Petia M. Vlahovska

Self-propelled particles move along circles rather than along a straight line when their driving force does not coincide with their propagation direction. Examples include confined bacteria and spermatozoa, catalytically driven nanorods,…

Soft Condensed Matter · Physics 2008-08-18 Sven van Teeffelen , Hartmut Löwen
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