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In this report, we analyse and simulate a chemotaxis model given by a system of stochastic reaction-diffusion equations posed on an evolving surface.

Cell Behavior · Quantitative Biology 2012-12-10 Don Praveen Amarasinghe , Andrew Aylwin , Pravin Madhavan , Chris Pettitt

Artificially evolving foraging behavior in simulated legged animals has proved to be a notoriously difficult task. Here, we co-evolve the morphology and controller for virtual organisms in a three-dimensional physically realistic…

Neural and Evolutionary Computing · Computer Science 2011-12-22 Nicolas Chaumont , Christoph Adami

In this paper we derive, starting from the basic principles of Thermodynamics, an extended version of the nonconserved Penrose-Fife phase transition model, in which dynamic boundary conditions are considered in order to take into account…

Analysis of PDEs · Mathematics 2013-01-24 Alain Miranville , Elisabetta Rocca , Giulio Schimperna , Antonio Segatti

The current paper is concerned with the asymptotic dynamics of two species competition systems with/without chemotaxis in heterogeneous media. In the previous work \cite{ITBWS17a}, we find conditions on the parameters in such systems for…

Dynamical Systems · Mathematics 2018-08-09 Tahir Bachar Issa , Wenxian Shen

Chemotaxis, the directional locomotion of cells towards a source of a chemical gradient, is an integral part of many biological processes - for example, bacteria motion, single-cell or multicellular organisms development, immune response,…

Analysis of PDEs · Mathematics 2021-03-29 Yishu Gong , Alexander Kiselev

Many processes in biology involve both reactions and chemotaxis. However, to the best of our knowledge, the question of interaction between chemotaxis and reactions has not yet been addressed either analytically or numerically. We consider…

Analysis of PDEs · Mathematics 2011-04-05 Alexander Kiselev , Lenya Ryzhik

The population dynamics of predator-prey systems in the presence of patch-specific predators are explored in a setting where the prey population has access to both habitats. The emphasis is in situations where patch-prey abundance drives…

Dynamical Systems · Mathematics 2009-07-31 F. Berezovskaya , S. Wirkus , C. Castillo-Chavez

With the increasing demand and complexity of networks, factors such as balancing the load, improving the performance, reducing delay and finding optimal path between nodes in a computer network have become crucial. The traditional routing…

Networking and Internet Architecture · Computer Science 2016-10-17 Chandana M , Sanjeev Thakur

Condensed active matter is exemplary for its capacity to morph and exhibit internal flows despite remaining cohered. To facilitate understanding of this ability, we investigate the cause of finger-like protrusions that emerge from…

Soft Condensed Matter · Physics 2021-01-01 Robert J. Wagner , Kristen Such , Ethan Hobbs , Franck J. Vernerey

A mathematical model for the poroelastic materials (PEM) with the variable volume is developed in multidimensional case. Governing equations of the model are constructed using the continuity equations, which reflect the well-known physical…

Mathematical Physics · Physics 2024-09-19 Roman Cherniha , Vasyl' Davydovych , Joanna Stachowska-Pietka , Jacek Waniewski

Simulation of population dynamics is a central research theme in computational biology, which contributes to understanding the interactions between predators and preys. Conventional mathematical tools of this theme, however, are incapable…

Multiagent Systems · Computer Science 2020-02-11 Jun Yamada , John Shawe-Taylor , Zafeirios Fountas

Simulations of the coevolution of many interacting species are performed using the Webworld model. The model has a realistic set of predator-prey equations that describe the population dynamics of the species for any structure of the food…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Christopher Quince , Paul G. Higgs , Alan J. McKane

Stochastic encounter-mating (SEM) models describe monogamous permanent pair formation in finite zoological populations of multitype females and males. In this article, we study SEM with Poisson firing times. First, we prove that the model…

Probability · Mathematics 2016-11-23 Onur Gün , Atilla Yilmaz

In this paper we analyse both the dynamics and the high density physics of the infinite dimensional lattice gas model for random heteropolymers recently introduced in \cite{jort}. Restricting ourselves to site-disordered heteropolymers, we…

Disordered Systems and Neural Networks · Physics 2009-11-07 H. Chakravorty , J. van Mourik , A. C. C. Coolen

Many real-world optimization problems occur in environments that change dynamically or involve stochastic components. Evolutionary algorithms and other bio-inspired algorithms have been widely applied to dynamic and stochastic problems.…

Neural and Evolutionary Computing · Computer Science 2020-01-30 Vahid Roostapour , Mojgan Pourhassan , Frank Neumann

Physics-guided sampling with diffusion priors has recently shown strong performance in solving complex systems of partial differential equations (PDEs) from sparse observations. However, these methods are typically evaluated on benchmark…

Computational Physics · Physics 2026-04-21 Andrew Millard , Zheng Zhao , Henrik Pedersen

Chemotaxis, i.e. motion generated by chemical gradients, is a motility mode shared by many living species that has been developed by evolution to optimize certain biological processes such as foraging or immune response. In particular,…

Soft Condensed Matter · Physics 2023-05-24 Hugues Meyer , Heiko Rieger

The aim of this paper is to study a PDE model for two diffusing species interacting by local size exclusion and global attraction. This leads to a nonlinear degenerate cross-diffusion system, for which we provide a global existence result.…

Analysis of PDEs · Mathematics 2017-03-21 Judith Berendsen , Martin Burger , Jan-Frederik Pietschmann

Chemotaxis is a directed cell movement in response to external chemical stimuli. In this paper, we propose a simple model for the origin of chemotaxis - namely how a directed movement in response to an external chemical signal may occur…

Analysis of PDEs · Mathematics 2023-06-30 Yishu Gong , Alexander Kiselev

We investigate the organization of traffic flow on preexisting uni- and bidirectional ant trails. Our investigations comprise a theoretical as well as an empirical part. We propose minimal models of uni- and bi-directional traffic flow…

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