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Recent work of M.D. Johnston et al. has produced sufficient conditions on the structure of a chemical reaction network which guarantee that the corresponding discrete state space system exhibits an extinction event. The conditions consist…

Optimization and Control · Mathematics 2017-01-11 Matthew D. Johnston

In 2002, Chowdhury et al. introduced a simplified model aimed at depicting the dynamics of single-lane unidirectional ant traffic. Despite efforts, an exact solution for the stationary state of this ant-trail model remains elusive. The…

Statistical Mechanics · Physics 2024-06-24 Ngo Phuoc Nguyen Ngoc , Huynh Anh Thi , Nguyen Van Vinh

Chemotaxis, the movement of an organism in response to chemical stimuli, is a typical feature of many microbiological systems. In particular, the social amoeba \textit{Disctyostelium discoideum} is widely used as a model organism, but it is…

Cell Behavior · Quantitative Biology 2025-08-04 Daniele Proverbio , Marco Maggiora

We develop and analyze a spatial temporal model of light driven ecotoxicological processes, motivated by an aquatic predator-prey system of algae and \textsl{Daphnia} subject to a contaminant. Population dynamics are driven by light, which…

Populations and Evolution · Quantitative Biology 2021-01-01 A. Ibragimov , A. Peace

In eukaryotic cell chemotaxis, cells extend and retract transient actin-driven protrusions at their membrane that facilitate both the detection of external chemical gradients and directional movement via the formation of focal adhesions…

Cell Behavior · Quantitative Biology 2025-09-25 Samuel W. S. Johnson , Maddy Parsons , Ruth E. Baker , Philip K. Maini

We study a system of reaction-diffusion equations posed on a bounded domain composed of subdomains separated by a connected network with a metric graph structure. The reaction-diffusion dynamics with anisotropic diffusion on the graph edges…

Analysis of PDEs · Mathematics 2025-10-28 Xiao Meng , Kei Fong Lam

Phenotypically structured equations arise in population biology to describe the interaction of species with their environment that brings the nutrients. This interaction usually leads to selection of the fittest individuals. Models used in…

Analysis of PDEs · Mathematics 2015-06-18 Alexander Lorz , Benoit Perthame

The traffic-like collective movement of ants on a trail can be described by a stochastic cellular automaton model. We have earlier investigated its unusual flow-density relation by using various mean field approximations and computer…

Statistical Mechanics · Physics 2009-11-10 A. Kunwar , A. John , K. Nishinari , A. Schadschneider , D. Chowdhury

Chemotaxis is a fundamental guidance mechanism of cells and organisms, responsible for attracting microbes to food, embryonic cells into developing tissues, immune cells to infection sites, animals towards potential mates, and…

Quantitative Methods · Quantitative Biology 2018-06-26 K. J. Painter

The ants process is a stochastic process introduced by Kious, Mailler and Schapira as a model for the phenomenon of ants finding shortest paths between their nest and a source of food (seen as two marked nodes in a finite graph), with no…

Probability · Mathematics 2026-02-02 Cécile Mailler , Zoé Varin

We develop a set of equations to describe the population dynamics of many interacting species in food webs. Predator-prey interactions are non-linear, and are based on ratio-dependent functional responses. The equations account for…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Barbara Drossel , Paul G. Higgs , Alan J. McKane

The division of labor (DOL) and task allocation among groups of ants living in a colony is thought to be highly efficient, and key to the robust survival of a colony. A great deal of experimental and theoretical work has been done toward…

Populations and Evolution · Quantitative Biology 2016-04-15 Jason M. Graham , Ivan L. Simpson-Kent , Marc A. Seid

In any ecosystem, the conditions of the environment and the characteristics of the species that inhabit it are entangled, co-evolving in space and time. We introduce a model that couples active agents with a dynamic environment, interpreted…

Populations and Evolution · Quantitative Biology 2025-12-10 G. Briozzo , G. J. Sibona , F. Peruani

Animal movement exhibits complex behavior which can be influenced by unobserved environmental conditions. We propose a model which allows for a spatially-varying movement rate and spatially-varying drift through a semiparametric potential…

Applications · Statistics 2017-02-28 James C. Russell , Ephraim M. Hanks , Murali Haran , David P. Hughes

Active walker models have recently proved their great value for describing the formation of clusters, periodic patterns, and spiral waves as well as the development of rivers, dielectric breakdown patterns, and many other structures. It is…

Statistical Mechanics · Physics 2009-10-31 Dirk Helbing , Frank Schweitzer , Joachim Keltsch , Peter Molnar

We study the steady states of a system of cross-diffusion equations arising from the modeling of chemotaxis with local sensing, where the motility is a decreasing function of the concentration of the chemical. In order to capture the many…

Analysis of PDEs · Mathematics 2023-11-27 Maxime Breden , Maxime Payan

Aerotaxis is the particular form of chemotaxis in which oxygen plays the role of both the attractant and the repellent. Aerotaxis occurs without methylation adaptation, and it leads to fast and complete aggregation toward the most favorable…

Classical Analysis and ODEs · Mathematics 2015-06-26 Barbara "Bori" C. Mazzag

We explore self-organizing strategies for role assignment in a foraging task carried out by a colony of artificial agents. Our strategies are inspired by various mechanisms of division of labor (polyethism) observed in eusocial insects like…

Artificial Intelligence · Computer Science 2011-09-06 Chris Marriott , Carlos Gershenson

In the present work, we investigate a model of the invasion of healthy tissue by cancer cells which is described by a system of nonlinear PDEs consisting of a cross-diffusion-reaction equation and two additional nonlinear ordinary…

Numerical Analysis · Mathematics 2023-07-18 Shahin Heydari , Petr Knobloch , Thoma Wick

The numerical convergence of a Telegraph Predator-Prey system is studied. This system of partial differential equations (PDEs) can describe various biological systems with reactive, diffusive and delay effects. Initially, our problem is…