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A graph $G=(V,E)$ is called a pairwise compatibility graph (PCG) if there exists an edge-weighted tree $T$ and two non-negative real numbers $d_{min}$ and $d_{max}$ such that each leaf $u$ of $T$ corresponds to a vertex $u \in V$ and there…

Combinatorics · Mathematics 2022-05-17 Sheikh Azizul Hakim , Bishal Basak Papan , Md. Saidur Rahman

A graph $G=(V,E)$ is a pairwise compatibility graph (PCG) if there exists an edge-weighted tree $T$ and two non-negative real numbers $d_{min}$ and $d_{max}$, $d_{min} \leq d_{max}$, such that each node $u \in V$ is uniquely associated to a…

Discrete Mathematics · Computer Science 2017-07-25 Pierluigi Baiocchi , Tiziana Calamoneri , Angelo Monti , Rossella Petreschi

A graph $G$ is called a pairwise compatibility graph (PCG) if there exists an edge weighted tree $T$ and two non-negative real numbers $d_{min}$ and $d_{max}$ such that each leaf $l_u$ of $T$ corresponds to a vertex $u \in V$ and there is…

Discrete Mathematics · Computer Science 2011-06-22 Tiziana Calamoneri , Rossella Petreschi , Blerina Sinaimeri

A graph $G=(V,E)$ with a vertex set $V$ and an edge set $E$ is called a pairwise compatibility graph (PCG, for short) if there are a tree $T$ whose leaf set is $V$, a non-negative edge weight $w$ in $T$, and two non-negative reals…

Data Structures and Algorithms · Computer Science 2020-07-23 Mingyu Xiao , Hiroshi Nagamochi

A graph $G$ is called a pairwise compatibility graph (PCG) if there exists an edge-weighted tree $T$ and two non-negative real numbers $d_{min}$ and $d_{max}$ such that each leaf $l_u$ of $T$ corresponds to a vertex $u \in V$ and there is…

Discrete Mathematics · Computer Science 2012-02-22 Tiziana Calamoneri , Dario Frascaria , Blerina Sinaimeri

A graph $G$ is a pairwise compatibility graph (PCG) if there exists an edge-weighted tree and an interval $I$, such that each leaf of the tree is a vertex of the graph, and there is an edge $\{ x, y \}$ in $G$ if and only if the weight of…

Combinatorics · Mathematics 2024-10-09 Tiziana Calamoneri , Manuel Lafond , Angelo Monti , Blerina Sinaimeri

Pairwise compatibility graphs (PCGs) with non-negative integer edge weights recently have been used to describe rare evolutionary events and scenarios with horizontal gene transfer. Here we consider the case that vertices are separated by…

Combinatorics · Mathematics 2020-05-26 Yangjing Long , Peter F. Stadler

A graph $G$ is called a pairwise compatibility graph (PCG, for short) if it admits a tuple $(T,w, d_{\min},d_{\max})$ of a tree $T$ whose leaf set is equal to the vertex set of $G$, a non-negative edge weight $w$, and two non-negative reals…

Data Structures and Algorithms · Computer Science 2020-07-23 Mingyu Xiao , Hiroshi Nagamochi

Pairwise Compatibility Graphs (PCGs) form a tree-metric graph class that originated in phylogeny and has since attracted sustained interest in graph theory. Several natural generalizations have been proposed in order to overcome the…

Combinatorics · Mathematics 2026-04-23 Sheikh Azizul Hakim , Md. Shamsuzzoha Bayzid

Threshold graphs are recursive deterministic network models that have been proposed for describing certain economic and social interactions. One drawback of this graph family is that it has limited generative attachment rules. To mitigate…

Social and Information Networks · Computer Science 2018-05-24 Vida Ravanmehr , Gregory J. Puleo , Sadegh Bolouki , Olgica Milenkovic

A graph $G(V,E)$ is a threshold graph if there exist non-negative reals $w_v, v \in V$ and $t$ such that for every $U \subseteq V$, $\sum_{v \in U} w_v\leq t$ if and only if $U$ is a stable set. The {\it threshold dimension} of a graph…

Combinatorics · Mathematics 2009-06-08 Diptendu Bhowmick

A graph $G$ is said to be the intersection of graphs $G_1,G_2,\ldots,G_k$ if $V(G)=V(G_1)=V(G_2)=\cdots=V(G_k)$ and $E(G)=E(G_1)\cap E(G_2)\cap\cdots\cap E(G_k)$. For a graph $G$, $\mathrm{dim}_{COG}(G)$ (resp. $\mathrm{dim}_{TH}(G)$)…

Discrete Mathematics · Computer Science 2020-01-06 Daphna Chacko , Mathew C. Francis

Reconstruction of evolutionary relationships between species is an important topic in the field of computational biology. Pairwise compatibility graphs (PCGs) are used to model such relationships. A graph is a PCG if its edges can be…

Discrete Mathematics · Computer Science 2024-10-17 Seemab Hayat , Naveed Ahmed Azam

In a paired threshold graph, each vertex has a weight, and two vertices are adjacent if their weight sum is large enough and their weight difference is small enough. It generalizes threshold graphs and unit interval graphs, both very well…

Data Structures and Algorithms · Computer Science 2019-10-01 Guozhen Rong , Yixin Cao , Jianxin Wang

We investigate the tractability of a simple fusion of two fundamental structures on graphs, a spanning tree and a perfect matching. Specifically, we consider the following problem: given an edge-weighted graph, find a minimum-weight…

Data Structures and Algorithms · Computer Science 2024-07-12 Kristóf Bérczi , Tamás Király , Yusuke Kobayashi , Yutaro Yamaguchi , Yu Yokoi

A graph $G$ is a \emph{max point-tolerance (MPT)} graph if each vertex $v$ of $G$ can be mapped to a \emph{pointed-interval} $(I_v, p_v)$ where $I_v$ is an interval of $\mathbb{R}$ and $p_v \in I_v$ such that $uv$ is an edge of $G$ iff $I_u…

An EPG-representation of a graph $G$ is a collection of paths in a plane square grid, each corresponding to a single vertex of $G$, so that two vertices are adjacent if and only if their corresponding paths share infinitely many points. In…

Discrete Mathematics · Computer Science 2017-11-15 Martin Pergel , Paweł Rzążewski

Deciding whether a collection of unrooted trees is compatible is a fundamental problem in phylogenetics. Two different graph-theoretic characterizations of tree compatibility have recently been proposed. In one of these, tree compatibility…

Discrete Mathematics · Computer Science 2012-10-16 Sudheer Vakati , David Fernández-Baca

Determining whether there exists a graph such that its crossing number and pair crossing number are distinct is an important open problem in geometric graph theory. We show that $\textit{cr}(G)=O(\mathop{\mathrm{pcr}}(G)^{3/2})$ for every…

Combinatorics · Mathematics 2022-11-17 Oriol Solé Pi

Let $\mathcal{G}$ be the set of simple graphs (or multigraphs) $G$ such that for each $G \in \mathcal{G}$ there exists at least two non-empty disjoint proper subsets $V_{1},V_{2}\subseteq V(G)$ satisfying $V(G)\setminus(V_{1} \cup…

Combinatorics · Mathematics 2018-11-19 Cunxiang Duan , Ligong Wang , Xiangxiang Liu
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