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Identifying gene splicing is a core and significant task confronted in modern collaboration between artificial intelligence and bioinformatics. Past decades have witnessed great efforts on this concern, such as the bio-plausible splicing…

Quantitative Methods · Quantitative Biology 2024-06-19 Qi-Jie Li , Qian Sun , Shao-Qun Zhang

Autonomous navigation in agricultural environments is challenged by varying field conditions that arise in arable fields. State-of-the-art solutions for autonomous navigation in such environments require expensive hardware such as RTK-GNSS.…

Computer Vision and Pattern Recognition · Computer Science 2023-08-11 Rajitha de Silva , Grzegorz Cielniak , Gang Wang , Junfeng Gao

Existing computer vision research in categorization struggles with fine-grained attributes recognition due to the inherently high intra-class variances and low inter-class variances. SOTA methods tackle this challenge by locating the most…

Computer Vision and Pattern Recognition · Computer Science 2021-07-01 Marcos V. Conde , Kerem Turgutlu

Background: Identification of causal SNPs in most genome wide association studies relies on approaches that consider each SNP individually. However, there is a strong correlation structure among SNPs that need to be taken into account.…

Applications · Statistics 2012-11-02 Verena Zuber , A. Pedro Duarte Silva , Korbinian Strimmer

Genetic interaction measures how different genes collectively contribute to a phenotype, and can reveal functional compensation and buffering between pathways under genetic perturbations. Recently, genome-wide screening for genetic…

Molecular Networks · Quantitative Biology 2015-03-17 Gang Fang , Wen Wang , Vanja Paunic , Benjamin Oately , Majda Haznadar , Michael Steinbach , Brian Van Ness , Chad L. Myers , Vipin Kumar

In medical imaging, scans often reveal objects with varied contrasts but consistent internal intensities or textures. This characteristic enables the use of low-frequency approximations for tasks such as segmentation and deformation field…

Image and Video Processing · Electrical Eng. & Systems 2024-01-19 Hang Zhang , Xiang Chen , Rongguang Wang , Renjiu Hu , Dongdong Liu , Gaolei Li

Graph Neural Networks (GNNs) face fundamental limitations in expressivity and capturing structural heterogeneity. Standard message-passing architectures are constrained by the 1-dimensional Weisfeiler-Leman (1-WL) test, unable to…

Machine Learning · Computer Science 2026-05-19 Asela Hevapathige , Ahad N. Zehmakan , Asiri Wijesinghe , Saman Halgamuge

Insects are the most important global pollinator of crops and play a key role in maintaining the sustainability of natural ecosystems. Insect pollination monitoring and management are therefore essential for improving crop production and…

Computer Vision and Pattern Recognition · Computer Science 2022-12-06 Malika Nisal Ratnayake , Don Chathurika Amarathunga , Asaduz Zaman , Adrian G. Dyer , Alan Dorin

The advent of high--throughput transcription profiling technologies has enabled identification of genes and pathways associated with disease, providing new avenues for precision medicine. A key challenge is to analyze this data in the…

Quantitative Methods · Quantitative Biology 2019-01-11 Sahil D. Shah , Rosemary Braun

Sum-Product Networks (SPNs) are recently introduced deep tractable probabilistic models by which several kinds of inference queries can be answered exactly and in a tractable time. Up to now, they have been largely used as black box density…

Machine Learning · Computer Science 2018-08-27 Antonio Vergari , Nicola Di Mauro , Floriana Esposito

Reliably characterised pulses are the starting point of any application of ultrafast techniques. Unfortunately, experimental constraints do not always allow optimising the characterisation conditions. This dictates the need for refined…

Optics · Physics 2024-07-04 Ilaria Gianani , Ian A. Walmsley , Marco Barbieri

Recent blind super-resolution (SR) methods typically consist of two branches, one for degradation prediction and the other for conditional restoration. However, our experiments show that a one-branch network can achieve comparable…

Computer Vision and Pattern Recognition · Computer Science 2021-08-03 Liangbin Xie , Xintao Wang , Chao Dong , Zhongang Qi , Ying Shan

Natural language and search interfaces intuitively facilitate data exploration and provide visualization responses to diverse analytical queries based on the underlying datasets. However, these interfaces often fail to interpret more…

Human-Computer Interaction · Computer Science 2024-02-20 Alexander Bendeck , Dennis Bromley , Vidya Setlur

Glioma is a common malignant brain tumor with distinct survival among patients. The isocitrate dehydrogenase (IDH) gene mutation provides critical diagnostic and prognostic value for glioma. It is of crucial significance to non-invasively…

Image and Video Processing · Electrical Eng. & Systems 2021-09-13 Yiran Wei , Yonghao Li , Xi Chen , Carola-Bibiane Schönlieb , Chao Li , Stephen J. Price

We posit that handwriting recognition benefits from complementary cues carried by the rasterized complex glyph and the pen's trajectory, yet most systems exploit only one modality. We introduce an end-to-end network that performs early…

Computer Vision and Pattern Recognition · Computer Science 2025-06-26 Ayush Lodh , Ritabrata Chakraborty , Shivakumara Palaiahnakote , Umapada Pal

Searching for local sequence patterns is one of the basic tasks in bioinformatics. Sequence patterns might have structural, functional or some other relevance, and numerous methods have been developed to detect and analyze them. These…

Quantitative Methods · Quantitative Biology 2018-08-01 Braslav Rabar , Strahil Ristov , Maja Zagorščak , Martin Rosenzweig , Pavle Goldstein

Agriculture faces a growing challenge with wildlife wreaking havoc on crops, threatening sustainability. The project employs advanced object detection, the system utilizes the Mobile Net SSD model for real-time animal classification. The…

Computer Vision and Pattern Recognition · Computer Science 2024-07-02 Balaji VS , Mahi AR , Anirudh Ganapathy PS , Manju M

DNA sequencing, especially of microbial genomes and metagenomes, has been at the core of recent research advances in large-scale comparative genomics. The data deluge has resulted in exponential growth in genomic datasets over the past…

Interpretable scientific machine learning often trades predictive performance for structural transparency. When physical targets arise from hierarchical and nonlinear descriptor entanglement, weakly interacting white-box models underfit,…

Materials Science · Physics 2026-03-30 Seong-Hoon Jang

Recent advancements in single-cell genomics necessitate precision in gene panel selection to interpret complex biological data effectively. Those methods aim to streamline the analysis of scRNA-seq data by focusing on the most informative…

Artificial Intelligence · Computer Science 2024-06-12 Weiliang Zhang , Zhen Meng , Dongjie Wang , Min Wu , Kunpeng Liu , Yuanchun Zhou , Meng Xiao