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Bound propagation is an important Artificial Intelligence technique used in Constraint Programming tools to deal with numerical constraints. It is typically embedded within a search procedure ("branch and prune") and used at every node of…
Grid graphs, and, more generally, $k\times r$ grid graphs, form one of the most basic classes of geometric graphs. Over the past few decades, a large body of works studied the (in)tractability of various computational problems on grid…
We study the parameterized complexity of the classical Edge Hamiltonian Path problem and give several fixed-parameter tractability results. First, we settle an open question of Demaine et al. by showing that Edge Hamiltonian Path is FPT…
The problem Parsimony Haplotyping (PH) asks for the smallest set of haplotypes which can explain a given set of genotypes, and the problem Minimum Perfect Phylogeny Haplotyping (MPPH) asks for the smallest such set which also allows the…
Given a graph $G$ with source and destination vertices $s,t\in V(G)$ respectively, \textsc{Tracking Paths} asks for a minimum set of vertices $T\subseteq V(G)$, such that the sequence of vertices encountered in each simple path from $s$ to…
The paper presents complexity results and performance guaranties for a family of approximation algorithms for an optimisation problem arising in software testing and manufacturing. The problem is formulated as a partitioning of a set where…
An st-shortest path, or st-path for short, in a graph G is a shortest (induced) path from s to t in G. Two st-paths are said to be adjacent if they differ on exactly one vertex. A reconfiguration sequence between two st-paths P and Q is a…
The problem Level Planarity asks for a crossing-free drawing of a graph in the plane such that vertices are placed at prescribed y-coordinates (called levels) and such that every edge is realized as a y-monotone curve. In the variant…
In an undirected graph $G=(V,E)$, we say $(A,B)$ is a pair of perfectly matched sets if $A$ and $B$ are disjoint subsets of $V$ and every vertex in $A$ (resp. $B$) has exactly one neighbor in $B$ (resp. $A$). The size of a pair of perfectly…
In this paper, we showcase the class XNLP as a natural place for many hard problems parameterized by linear width measures. This strengthens existing $W[1]$-hardness proofs for these problems, since XNLP-hardness implies $W[t]$-hardness for…
For many constraint satisfaction problems, the algorithm which chooses a random assignment achieves the best possible approximation ratio. For instance, a simple random assignment for {\sc Max-E3-Sat} allows 7/8-approximation and for every…
Given a bipartite graph $G$, the \textsc{Bicluster Editing} problem asks for the minimum number of edges to insert or delete in $G$ so that every connected component is a bicluster, i.e. a complete bipartite graph. This has several…
Structural graph parameters, such as treewidth, pathwidth, and clique-width, are a central topic of study in parameterized complexity. A main aim of research in this area is to understand the "price of generality" of these widths: as we…
The binary perfect phylogeny model is too restrictive to model biological events such as back mutations. In this paper we consider a natural generalization of the model that allows a special type of back mutation. We investigate the problem…
Efficient text embedding is crucial for large-scale natural language processing (NLP) applications, where storage and computational efficiency are key concerns. In this paper, we explore how using binary representations (barcodes) instead…
The problem of matching a query string to a directed graph, whose vertices are labeled by strings, has application in different fields, from data mining to computational biology. Several variants of the problem have been considered,…
A kernelization is an efficient algorithm that given an instance of a parameterized problem returns an equivalent instance of size bounded by some function of the input parameter value. It is quite well understood which problems do or…
Genome rearrangements are events where large blocks of DNA exchange places during evolution. The analysis of these events is a promising tool for understanding evolutionary genomics, providing data for phylogenetic reconstruction based on…
Finding paths in graphs is a fundamental graph-theoretic task. In this work, we we are concerned with finding a path with some constraints on its length and the number of vertices neighboring the path, that is, being outside of and incident…
We study variants of the Optimal Refugee Resettlement problem where a set $F$ of refugee families need to be allocated to a set $L$ of possible places of resettlement in a feasible and optimal way. Feasibility issues emerge from the…