English

Improved Kernelization and Fixed-parameter Algorithms for Bicluster Editing

Data Structures and Algorithms 2024-10-24 v2

Abstract

Given a bipartite graph GG, the \textsc{Bicluster Editing} problem asks for the minimum number of edges to insert or delete in GG so that every connected component is a bicluster, i.e. a complete bipartite graph. This has several applications, including in bioinformatics and social network analysis. In this work, we study the parameterized complexity under the natural parameter kk, which is the number of allowed modified edges. We first show that one can obtain a kernel with 4.5k4.5k vertices, an improvement over the previously known quadratic kernel. We then propose an algorithm that runs in time O(2.581k)O^*(2.581^k). Our algorithm has the advantage of being conceptually simple and should be easy to implement.

Keywords

Cite

@article{arxiv.2410.13123,
  title  = {Improved Kernelization and Fixed-parameter Algorithms for Bicluster Editing},
  author = {Manuel Lafond},
  journal= {arXiv preprint arXiv:2410.13123},
  year   = {2024}
}

Comments

The author acknowledges the contributions of Beno\^it Charbonneau and Pierre-Luc Parent for their help in finding the $4.5k$ lower bound on the kernel size