Related papers: Mind the Gap
The dictionary matching with gaps problem is to preprocess a dictionary $D$ of $d$ gapped patterns $P_1,\ldots,P_d$ over alphabet $\Sigma$, where each gapped pattern $P_i$ is a sequence of subpatterns separated by bounded sequences of don't…
Various grammar compression algorithms have been proposed in the last decade. A grammar compression is a restricted CFG deriving the string deterministically. An efficient grammar compression develops a smaller CFG by finding duplicated…
This paper studies a new online problem, referred to as \emph{min-cost perfect matching with delays (MPMD)}, defined over a finite metric space (i.e., a complete graph with positive edge weights obeying the triangle inequality)…
We study a broad class of algorithmic problems with an "additive flavor" such as computing sumsets, 3SUM, Subset Sum and geometric pattern matching. Our starting point is that these problems can often be solved efficiently for integers,…
We revisit the algorithmic problem of finding a triangle in a graph (\textsc{Triangle Detection}), and examine its relation to other problems such as \textsc{3Sum}, \textsc{Independent Set}, and \textsc{Graph Coloring}. We obtain several…
The dictionary matching is a task to find all occurrences of patterns in a set $D$ (called a dictionary) on a text $T$. The Aho-Corasick-automaton (AC-automaton) is a data structure which enables us to solve the dictionary matching problem…
The 3SUM conjecture has proven to be a valuable tool for proving conditional lower bounds on dynamic data structures and graph problems. This line of work was initiated by P\v{a}tra\c{s}cu (STOC 2010) who reduced 3SUM to an offline…
In the $k$-mismatch problem we are given a pattern of length $n$ and a text and must find all locations where the Hamming distance between the pattern and the text is at most $k$. A series of recent breakthroughs have resulted in an…
The 3SUM problem is one of the cornerstones of fine-grained complexity. Its study has led to countless lower bounds, but as has been sporadically observed before -- and as we will demonstrate again -- insights on 3SUM can also lead to…
We give cell-probe bounds for the computation of edit distance, Hamming distance, convolution and longest common subsequence in a stream. In this model, a fixed string of $n$ symbols is given and one $\delta$-bit symbol arrives at a time in…
The problem of Text Indexing is a fundamental algorithmic problem in which one wishes to preprocess a text in order to quickly locate pattern queries within the text. In the ever evolving world of dynamic and on-line data, there is also a…
We propose a general method for combinatorial online learning problems whose offline optimization problem can be solved efficiently via a dynamic programming algorithm defined by an arbitrary min-sum recurrence. Examples include online…
The text-to-pattern Hamming distances problem asks to compute the Hamming distances between a given pattern of length $m$ and all length-$m$ substrings of a given text of length $n\ge m$. We focus on the $k$-mismatch version of the problem,…
We study the internal dictionary matching (IDM) problem where a dictionary $\mathcal{D}$ containing $d$ substrings of a text $T$ is given, and each query concerns the occurrences of patterns in $\mathcal{D}$ in another substring of $T$. We…
The distance sensitivity oracle (DSO) problem asks us to preprocess a given graph $G=(V,E)$ in order to answer queries of the form $d(x,y,e)$, which denotes the shortest path distance in $G$ from vertex $x$ to vertex $y$ when edge $e$ is…
Jumbled indexing is the problem of indexing a text $T$ for queries that ask whether there is a substring of $T$ matching a pattern represented as a Parikh vector, i.e., the vector of frequency counts for each character. Jumbled indexing has…
In this paper, we first remodel the line coverage as a 1D discrete problem with co-linear targets. Then, an order-based greedy algorithm, called OGA, is proposed to solve the problem optimally. It will be shown that the existing order in…
Graph data is ubiquitous in academia and industry, from social networks to bioinformatics. The pervasiveness of graphs today has raised the demand for algorithms that can answer various questions: Which products would a user like to…
This paper introduces online algorithms with unreliable guidance (OAG), a model for ML-augmented online decision-making that cleanly separates the predictive and algorithmic components, thus offering a single, well-defined analysis…
This paper initiates the study of online algorithms for the maximum weight $b$-matching problem, a generalization of maximum weight matching where each node has at most $b \geq 1$ adjacent matching edges. The problem is motivated by…