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The main topic of this thesis is the analysis of evolution equations reflecting issues in ecology and population dynamics. In mathematical modelling, the impact of environmental elements and the interaction between species is read into the…

Analysis of PDEs · Mathematics 2021-03-08 Elisa Affili

Collective escaping is a ubiquitous phenomenon in animal groups. Symmetry breaking caused by panic escape exhibits a shared feature across species that one exit is used more than the other when agents escaping from a closed space with two…

Quantitative Methods · Quantitative Biology 2020-06-04 Geng Li , Weijia Wang , Jiahui Lin , Zhiyang Huang , Jianqiang Liang , Huabo Wu , Jianping Wen , Zengru Di , Bertrand Roehner , Zhangang Han

We propose a simple adaptive-network model describing recent swarming experiments. Exploiting an analogy with human decision making, we capture the dynamics of the model by a low-dimensional system of equations permitting analytical…

Disordered Systems and Neural Networks · Physics 2011-07-15 Cristián Huepe , Gerd Zschaler , Anne-Ly Do , Thilo Gross

Switching interacting particle systems studied in probability theory are the stochastic processes of hopping particles on a lattice made up of slow and fast particles, where the switching between these types of particles occurs randomly at…

Statistical Mechanics · Physics 2024-05-14 Ayana Ezoe , Saori Morimoto , Yuya Tanaka , Makoto Katori , Hiraku Nishimori

The study of interactions between multiple species in an ecosystem is an active and impactful direction of inquiry. This is true in particular for fragile systems in which even small perturbations of their functional parameters can produce…

Populations and Evolution · Quantitative Biology 2025-01-14 Anca Radulescu , Richard Halpern , Drew Kozlowski , Conor O'Riordan

Ants are known to be able to find paths of minimal length between the nest and food sources. The deposit of pheromones while they search for food and their chemotactical response to them has been proposed as a crucial element in the…

Populations and Evolution · Quantitative Biology 2011-03-09 M. Vela-Pérez , M. A. Fontelos , J. J. L. Velázquez

We study a two-species cross-diffusion model that is inspired by a system of convection-diffusion equations derived from an agent-based model on a two-dimensional discrete lattice. The latter model has been proposed to simulate gang…

Analysis of PDEs · Mathematics 2021-10-19 Alethea B. T. Barbaro , Nancy Rodriguez , Havva Yoldaş , Nicola Zamponi

The mechanisms of emergence and evolution of collective behaviours in dynamical Multi-Agent Systems (MAS) of multiple interacting agents, with diverse behavioral strategies in co-presence, have been undergoing mathematical study via…

Artificial Intelligence · Computer Science 2022-05-17 The Anh Han

The survival of the domestic cat (Felis catus) in various ecosystems has become increasingly relevant due to its impact on wildlife, public health, and society. In countries like Mexico, social factors such as abandonment have led to the…

Populations and Evolution · Quantitative Biology 2024-12-20 Rodrigo Perusquía Cortés , Pablo Padilla Longoria

This project is motivated by the costs related with the documented risks of the introduction of non-native invasive species of plants, animals, or pathogens associated with travel and international trade. Such invasive species often have no…

Other Quantitative Biology · Quantitative Biology 2013-08-19 Valerie Cheathon , Agustin Flores , Victor Suriel , Octavious Talbot , Dustin Padilla , Marta Sarzynska , Adrian Smith , Luis Melara

Experiments in predator-prey systems show the emergence of long-term cycles. Deterministic model typically fails in capturing these behaviors, which emerge from the microscopic interplay of individual based dynamics and stochastic effects.…

Numerical Analysis · Mathematics 2022-03-03 Giacomo Albi , Roberto Chignola , Federica Ferrarese

We present a study of the spatial correlation functions of a one-dimensional reaction-diffusion system in both equilibrium and out of equilibrium. For the numerical simulations we have employed the Gillespie algorithm dividing the system in…

Statistical Mechanics · Physics 2014-01-08 Jorge Luis Hita , José María Ortiz de Zárate

Chemical reaction systems with a low to moderate number of molecules are typically modeled as discrete jump Markov processes. These systems are oftentimes simulated with methods that produce statistically exact sample paths such as the…

Molecular Networks · Quantitative Biology 2015-05-13 David F. Anderson

We theoretically and numerically study the problem of optimal control of large-scale autonomous systems under explicitly adversarial conditions, including probabilistic destruction of agents during the simulation. Large-scale autonomous…

Optimization and Control · Mathematics 2021-08-06 Theodoros Tsatsanifos , Abram H. Clark , Claire Walton , Isaac Kaminer , Qi Gong

In this paper, we investigate a two-species competition model in a landscape consisting of a finite number of adjacent patches. For the two-patch scenario, by treating edge behavior at the interface as a strategy, it has been shown that…

Dynamical Systems · Mathematics 2025-12-10 Kuiyue Liu , Shanshan Chen

We are interested in modeling some two-level population dynamics, resulting from the interplay of ecological interactions and phenotypic variation of individuals (or hosts) and the evolution of cells (or parasites) of two types living in…

Probability · Mathematics 2011-01-21 Sylvie Méléard , Sylvie Roelly

Bayesian modelling of dynamic systems must achieve a compromise between providing a complete mechanistic specification of the process while retaining the flexibility to handle those situations in which data is sparse relative to model…

Machine Learning · Statistics 2018-11-02 Daniel J. Tait , Bruce J. Worton

I introduce an axiomatic representation, called ecoset, to consider interactions between species in ecological systems. For interspecific competition, the exclusion conjecture (Gause) is put in a symbolic way and used as a basic operational…

Populations and Evolution · Quantitative Biology 2007-05-23 J. C. Flores

Large-Scale Multi-Agent Systems (LS-MAS) consist of several autonomous components, interacting in a non-trivial way, so that the emerging behaviour of the ensemble depends on the individual dynamics of the components and their reciprocal…

Systems and Control · Electrical Eng. & Systems 2025-01-03 Andrea Giusti

In an experimental study of single enzyme reactions, it has been proposed that the rate constants of the enzymatic reactions fluctuate randomly, according to a given distribution. To quantify the uncertainty arising from random rate…

Quantitative Methods · Quantitative Biology 2012-02-07 Chia Ying Lee
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