Related papers: Seer: An analysis package for LHCO files

scida is a Python package for reading and analyzing large scientific data sets with support for various cosmological and galaxy formation simulations out-of-the-box. Data access is provided through a hierarchical dictionary-like data…

Iris is an extensible application that provides astronomers with a user-friendly interface capable of ingesting broad-band data from many different sources in order to build, explore, and model spectral energy distributions (SEDs). Iris…

ruptures is a Python library for offline change point detection. This package provides methods for the analysis and segmentation of non-stationary signals. Implemented algorithms include exact and approximate detection for various…

We here present SIMLR (Single-cell Interpretation via Multi-kernel LeaRning), an open-source tool that implements a novel framework to learn a sample-to-sample similarity measure from expression data observed for heterogenous samples. SIMLR…

First-principles computational spectroscopy is a critical tool for interpreting experiment, performing structure refinement, and developing new physical understanding. Systematically setting up input files for different simulation codes and…

The analysis of spatial observations on a sphere is important in areas such as geosciences, physics and embryo research, just to name a few. The purpose of the package rcosmo is to conduct efficient information processing, visualisation,…

An easy way to define and visualize geometry for PHITS input files introduced. Suggested FitsGeo Python package helps to define surfaces as Python objects and manipulate them conveniently. VPython assists to view defined geometry…

Kete is an open-source software package for quickly and accurately predicting the positions and magnitudes of asteroids and comets in large-scale, all-sky surveys. It can predict observable objects for any ground or space-based telescope.…

We introduce an R package for fitting Stable Isotope Mixing Models (SIMMs) via both Markov chain Monte Carlo and Variational Bayes. The package is mainly used for estimating dietary contributions from food sources taken via measurements of…

We present a software package, IDA, which can easily handle two-dimensional spectroscopy data. IDA has been written in IDL and offers a window-based interface. The available tools can visualize a recovered image from spectra at any desired…

This paper describes and illustrates the functionality of the baker R package. The package estimates a suite of nested partially-latent class models (NPLCM) for multivariate binary responses that are observed under a case-control design.…

Monitoring progress on the United Nations Sustainable Development Goals (SDGs) is important for both academic and non-academic organizations. Existing approaches to monitoring SDGs have focused on specific data types; namely, publications…

SimOmics is an R package designed to generate realistic, multivariate, and multi-omics synthetic datasets. It is intended for use in benchmarking, method development, and reproducibility in bioinformatics, particularly in the context of…

High-level synthesis (HLS) is a process that automatically translates a software program in a high-level language into a low-level hardware description. However, the hardware designs produced by HLS tools still suffer from a significant…

VISPA is a novel development environment for high energy physics analyses, based on a combination of graphical and textual steering. The primary aim of VISPA is to support physicists in prototyping, performing, and verifying a data analysis…

In this paper, we present RESIN-EDITOR, an interactive event graph visualizer and editor designed for analyzing complex events. Our RESIN-EDITOR system allows users to render and freely edit hierarchical event graphs extracted from…

Sampling discrepancies between different manufacturers and models of lidar sensors result in inconsistent representations of objects. This leads to performance degradation when 3D detectors trained for one lidar are tested on other types of…

The increasingly sophisticated environment in which attackers operate makes software security an even greater challenge in open-source projects, where malicious packages are prevalent. Static analysis tools, such as Malcontent, are highly…

Static analysis is the analysis of a program without executing it, usually carried out by an automated tool. Symbolic execution is a popular static analysis technique used both in program verification and in bug detection software. It works…

Program understanding is an important aspect in Software Maintenance and Reengineering. Understanding the program is related to execution behaviour and relationship of variable involved in the program. The task of finding all statements in…