Related papers: Inferring an Indeterminate String from a Prefix Gr…
The aim of this thesis is to present an extension to the string graphs of Dixon, Duncan and Kissinger that allows the finite representation of certain infinite families of graphs and graph rewrite rules, and to demonstrate that a logic can…
The suffix array, perhaps the most important data structure in modern string processing, is often augmented with the longest common prefix (LCP) array which stores the lengths of the LCPs for lexicographically adjacent suffixes of a string.…
The sets of vertices and edges of an undirected, simple, finite, connected graph $G$ are denoted by $V(G)$ and $E(G)$, respectively. An arbitrary nonempty finite subset of consecutive integers is called an interval. An injective mapping…
The feasible region $\Omega_{{\rm ind}}(F)$ of a graph $F$ is the collection of points $(x,y)$ in the unit square such that there exists a sequence of graphs whose edge densities approach $x$ and whose induced $F$-densities approach $y$. A…
The {\em distinguishing number} of a group $G$ acting faithfully on a set $V$ is the least number of colors needed to color the elements of $V$ so that no non-identity element of the group preserves the coloring. The {\em distinguishing…
The prime graph of a finite group $G$ is the labelled graph $\Gamma(G)$ with vertices the prime divisors of $|G|$ and edges the pairs $\{p,q\}$ for which $G$ contains an element of order $pq$. A group $G$ is recognisable by its prime graph…
In this note we expose some surprising connections between string theory and statistical inference. We consider a large collective of agents sweeping out a family of nearby statistical models for an M-dimensional manifold of statistical…
Given an alphabet $S$, we consider the size of the subsets of the full sequence space $S^{\rm {\bf Z}}$ determined by the additional restriction that $x_i\not=x_{i+f(n)},\ i\in {\rm {\bf Z}},\ n\in {\rm {\bf N}}.$ Here $f$ is a positive,…
An infinite binary sequence has randomness rate at least $\sigma$ if, for almost every $n$, the Kolmogorov complexity of its prefix of length $n$ is at least $\sigma n$. It is known that for every rational $\sigma \in (0,1)$, on one hand,…
Given a set $F$ of words, one associates to each word $w$ in $F$ an undirected graph, called its extension graph, and which describes the possible extensions of $w$ on the left and on the right. We investigate the family of sets of words…
We say that finite groups are isospectral if they have the same sets of orders of elements. It is known that every nonsolvable finite group $G$ isospectral to a finite simple group has a unique nonabelian composition factor, that is, the…
Pattern matching on graphs has been widely studied lately due to its importance in genomics applications. Unfortunately, even the simplest problem of deciding if a string appears as a subpath of a graph admits a quadratic lower bound under…
We consider the problem of finding repetitive structures and inherent patterns in a given string $\s{s}$ of length $n$ over a finite totally ordered alphabet. A border $\s{u}$ of a string $\s{s}$ is both a prefix and a suffix of $\s{s}$…
Given a set B of finite rooted graphs and a radius r as an input, we prove that it is undecidable to determine whether there exists a sequence (G_i) of finite bounded degree graphs such that the rooted r-radius neighbourhood of a random…
A retract of a graph $\Gamma$ is an induced subgraph $\Psi$ of $\Gamma$ such that there exists a homomorphism from $\Gamma$ to $\Psi$ whose restriction to $\Psi$ is the identity map. A graph is a core if it has no nontrivial retracts. In…
The status of a vertex $x$ in a graph is the sum of the distances between $x$ and all other vertices. Let $G$ be a connected graph. The status sequence of $G$ is the list of the statuses of all vertices arranged in nondecreasing order. $G$…
Let $G$ be a graph and $A$ be its adjacency matrix. A graph $G$ is invertible if its adjacency matrix $A$ is invertible and the inverse of $G$ is a weighted graph with adjacency matrix $A^{-1}$. A signed graph $(G,\sigma)$ is a weighted…
Strings in the real world are often encoded with some level of uncertainty. In the character-level uncertainty model, an uncertain string $X$ of length $n$ on an alphabet $\Sigma$ is a sequence of $n$ probability distributions over…
A {\it fractional matching} of a graph $G$ is a function $f$ giving each edge a number in $[0,1]$ so that $\sum_{e\in \Gamma(v)}f(e)\leq 1$ for each $v\in V(G)$, where $\Gamma(v)$ is the set of edges incident to $v$. The {\it fractional…
A signed graph $\Gamma$ is said to be determined by its spectrum if every signed graph with the same spectrum as $\Gamma$ is switching isomorphic with $\Gamma$. Here it is proved that the path $P_n$, interpreted as a signed graph, is…