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Related papers: Data management to support reproducible research

200 papers

Scientific data governance should prioritize maximizing the utility of data throughout the research lifecycle. Research software systems that enable analysis reproducibility inform data governance policies and assist administrators in…

Many scientific applications are I/O intensive and generate or access large data sets, spanning hundreds or thousands of "files." Management, storage, efficient access, and analysis of this data present an extremely challenging task. We…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 Jaechun No , Rajeev Thakur , Dinesh Kaushik , Lori Freitag , Alok Choudhary

The increasingly collaborative, globalized nature of scientific research combined with the need to share data and the explosion in data volumes present an urgent need for a scientific data management system (SDMS). An SDMS presents a…

Databases · Computer Science 2020-04-09 Dale Stansberry , Suhas Somnath , Jessica Breet , Gregory Shutt , Mallikarjun Shankar

Reproducibility should be a cornerstone of science as it enables validation and reuse. In recent years, the scientific community and the general public became increasingly aware of the reproducibility crisis, i.e. the wide-spread inability…

Human-Computer Interaction · Computer Science 2020-12-07 Sebastian Stefan Feger

Data management, which encompasses activities and strategies related to the storage, organization, and description of data and other research materials, helps ensure the usability of datasets -- both for the original research team and for…

Digital Libraries · Computer Science 2022-04-14 John A. Borghi , Ana E. Van Gulick

Increasingly, artificial intelligence (AI) and machine learning (ML) are used in eScience applications [9]. While these approaches have great potential, the literature has shown that ML-based approaches frequently suffer from results that…

Machine Learning · Computer Science 2024-07-03 Zhiwei Li , Carl Kesselman , Mike D'Arch , Michael Pazzani , Benjamin Yizing Xu

Modern technologies are enabling scientists to collect extraordinary amounts of complex and sophisticated data across a huge range of scales like never before. With this onslaught of data, we can allow the focal point to shift towards…

The increasing volumes of data produced by high-throughput instruments coupled with advanced computational infrastructures for scientific computing have enabled what is often called a {\em Fourth Paradigm} for scientific research based on…

This document explores the advantages of integrating open source software and practices in managing a scientific lab, emphasizing reproducibility and the avoidance of pitfalls. It details practical applications from website management using…

Computers and Society · Computer Science 2024-05-14 Julien Cohen-Adad

To ensure the fairness and trustworthiness of machine learning (ML) systems, recent legislative initiatives and relevant research in the ML community have pointed out the need to document the data used to train ML models. Besides,…

Machine Learning · Computer Science 2024-12-18 Joan Giner-Miguelez , Abel Gómez , Jordi Cabot

In the recent years, there has been significant advancement in the areas of scientific data management and retrieval techniques, especially in terms of standards and protocols for archiving data. Oak Ridge National Laboratory Distributed…

Information Theory · Computer Science 2011-01-12 Ranjeet Devarakonda , Giri Palanisamy

Dynamo is a full-stack software solution for scientific data management. Dynamo's architecture is modular, extensible, and customizable, making the software suitable for managing data in a wide range of installation scales, from a few…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-05-18 Yutaro Iiyama , Benedikt Maier , Daniel Abercrombie , Maxim Goncharov , Christoph Paus

Scientific applications produce a huge amount of data, which imposes serious management and analysis challenges. In particular, limitations in current database management systems prevent their adoption in simulation applications, in which…

Databases · Computer Science 2019-03-18 Hermano Lustosa , Fabio Porto

We discuss important aspects of HCI research regarding Research Data Management (RDM) to achieve better publication processes and higher reuse of HCI research results. Various context elements of RDM for HCI are discussed, including…

Human-Computer Interaction · Computer Science 2025-02-03 David Goedicke , Mark Colley , Sebastian S. Feger , Michael Goedicke , Bastian Pfleging , Wendy Ju

Scientific processes rely on software as an important tool for data acquisition, analysis, and discovery. Over the years sustainable software development practices have made progress in being considered as an integral component of research.…

Software Engineering · Computer Science 2023-12-21 Akash Dhruv , Anshu Dubey

Science has a data management problem, as well as a project management problem. While industrial-grade data science teams have embraced the agile mindset, and adopted or created all kind of tools to create reproducible workflows,…

Computers and Society · Computer Science 2022-07-05 Juan Julián Merelo-Guervós , Mario García-Valdez

Conservation science depends on an accurate understanding of what's happening in a given ecosystem. How many species live there? What is the makeup of the population? How is that changing over time? Species Distribution Modeling (SDM) seeks…

Machine Learning · Computer Science 2021-07-23 Sara Beery , Elijah Cole , Joseph Parker , Pietro Perona , Kevin Winner

Data analytics and data science play a significant role in nowadays society. In the context of Smart Grids (SG), the collection of vast amounts of data has seen the emergence of a plethora of data analysis approaches. In this paper, we…

Other Computer Science · Computer Science 2019-12-02 Bruno Rossi , Stanislav Chren

Advances in technology and computing hardware are enabling scientists from all areas of science to produce massive amounts of data using large-scale simulations or observational facilities. In this era of data deluge, effective coordination…

Databases · Computer Science 2015-03-31 Spyros Blanas , Surendra Byna

Storing data is easy, but finding and using data is not. It is desirable that the data is stored in a structured format, which can be preserved and retrieved in future. Creating Metadata for the data is one way of creating structured data…

Information Theory · Computer Science 2011-01-04 Ranjeet Devarakonda , Giri Palanisamy , Jim Green
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