English
Related papers

Related papers: Actin polymerization front propagation in a comb-r…

200 papers

The polymerization dynamics of double-stranded polymers, such as actin filaments, is investigated theoretically using simple chemical kinetic models that explicitly take into account some microscopic details of the polymer structure and the…

Soft Condensed Matter · Physics 2009-11-10 Evgeny B. Stukalin , Anatoly B. Kolomeisky

Actin is a filamentary protein which has many remarkable properties making it an ideal system for the study of the dynamics and mechanics of semi-flexible polymer solutions and gels; actin has a persistence length of over 10 microns and can…

Soft Condensed Matter · Physics 2008-02-03 A. C. Maggs

In this work, we propose an asymptotic preserving scheme for a non-linear kinetic reaction-transport equation, in the regime of sharp interface. With a non-linear reaction term of KPP-type, a phenomenon of front propagation has been proved…

Numerical Analysis · Mathematics 2018-05-23 Hélène Hivert

This paper is concerned with some nonlinear propagation phenomena for reaction-advection-diffusion equations with Kolmogrov-Petrovsky-Piskunov (KPP) type nonlinearities in general periodic domains or in infinite cylinders with oscillating…

Analysis of PDEs · Mathematics 2010-11-23 Mohammad El Smaily

We consider reaction-diffusion equations with combustion-type non-linearities in two dimensions and study speed-up of their pulsating fronts by general periodic incompressible flows with a cellular structure. We show that the occurence of…

Analysis of PDEs · Mathematics 2009-11-13 Andrej Zlatos

Polymerization of actin proteins into dynamic structures is essential to eukaryotic cell life. This has motivated a large body of in vitro experiments measuring polymerization kinetics of individual filaments. Here we model these kinetics,…

Biomolecules · Quantitative Biology 2009-11-10 Dimitrios Vavylonis , Qingbo Yang , Ben O'Shaughnessy

This paper is devoted to the study of the asymptotic behaviors of the minimal speed of propagation of pulsating traveling fronts solving the Fisher-KPP reaction-advection-diffusion equation within either a large drift, a mixture of large…

Analysis of PDEs · Mathematics 2011-04-15 Mohammad El Smaily , Stephane Kirsch

A numerical study of the role of anomalous diffusion in front propagation in reaction-diffusion systems is presented. Three models of anomalous diffusion are considered: fractional diffusion, tempered fractional diffusion, and a model that…

Pattern Formation and Solitons · Physics 2014-09-11 D. del-Castillo-Negrete

We consider here a model of accelerating fronts, introduced in [2], consisting of one equation with nonlocal diffusion on a line, coupled via the boundary condition with a reaction-diffusion equation of the Fisher-KPP type in the upper…

Analysis of PDEs · Mathematics 2019-11-11 Anne-Charline Chalmin , Jean-Michel Roquejoffre

We determine the asymptotic spreading speed of the solutions of a Fisher-KPP reaction-diffusion equation, starting from compactly supported initial data, when the diffusion coefficient is a fixed bounded monotone profile that is shifted at…

Analysis of PDEs · Mathematics 2021-03-30 Grégory Faye , Thomas Giletti , Matt Holzer

We study a reaction diffusion system where we consider a non-gaussian process instead of a standard diffusion. If the process increments follow a probability distribution with tails approaching to zero faster than a power law, the usual…

Cellular Automata and Lattice Gases · Physics 2009-11-07 Rosaria Mancinelli , Davide Vergni , Angelo Vulpiani

We consider asymptotic problems concerning the motion of interface separating the regions of large and small values of the solution of a reaction-diffusion equation in the media consisting of domains with different characteristics…

Probability · Mathematics 2018-08-29 Mark Freidlin , Leonid Koralov

We take interest in a reaction-diffusion system which has been recently proposed [11] as a model for the effect of a road on propagation phenomena arising in epidemiology and ecology. This system consists in coupling a classical Fisher-KPP…

Analysis of PDEs · Mathematics 2015-09-08 Thomas Giletti , Léonard Monsaingeon , Maolin Zhou

The polymerization of actin via branching at a cell membrane containing nucleation-promoting factors is simulated using a stochastic-growth methodology. The polymerized-actin distribution displays three types of behavior: a) traveling…

Biological Physics · Physics 2015-05-19 Anders E. Carlsson

We study analytically and numerically a model describing front propagation of a KPP reaction in a fluid flow. The model consists of coupled one-dimensional reaction-diffusion equations with different drift coefficients. The main rigorous…

Analysis of PDEs · Mathematics 2007-05-23 Lam Raga A. Markely , David Andrzejewski , Erick Butzlaff , Alexander Kiselev

Inside cells of living organisms, actin filaments and microtubules self-assemble and dissemble dynamically by incorporating actin or tubulin from the cell plasma or releasing it into their tips' surroundings. Such reaction-diffusion systems…

Biological Physics · Physics 2019-09-04 Johannes Pausch , Gunnar Pruessner

We study the asymptotic spreading of Kolmogorov-Petrovsky-Piskunov (KPP) fronts in heterogeneous shifting habitats, with any number of shifting speeds, by further developing the method based on the theory of viscosity solutions of…

Analysis of PDEs · Mathematics 2021-01-22 King-Yeung Lam , Xiao Yu

We review the physical properties of macromolecular networks, consisting of semiflexible polymers such as actin. We start by giving a theoretical analysis of the conformational statistics and mechanical response of single filaments.…

Soft Condensed Matter · Physics 2008-02-03 Erwin Frey , Klaus Kroy , Jan Wilhelm , Erich Sackmann

We consider a reaction-diffusion system for two densities lying in adjacent domains of $\mathbb{R}^N$. We treat two configurations: either a cylinder and its complement, or two half-spaces. Diffusion and reaction heterogeneities for the two…

Analysis of PDEs · Mathematics 2025-06-06 Henri Berestycki , Luca Rossi , Andrea Tellini

We discuss the front propagation in the $A+B\rightarrow 2A$ reaction under subdiffusion which is described by continuous time random walks with a heavy-tailed power law waiting time probability density function. Using a crossover argument,…

Statistical Mechanics · Physics 2014-06-03 D. Froemberg , H. H. Schmidt-Martens , I. M. Sokolov , F. Sagués
‹ Prev 1 2 3 10 Next ›